| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2759 |
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| Symbol | |
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| ID | 8253867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3262480 |
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| End bp | 3265230 |
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| Gene Length | 2751 bp |
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| Protein Length | 916 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936407 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003093022 |
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| Protein GI | 255532650 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.534251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC TAATCTATTT CCTTGGTTTA TTTTTTTTTA CGATTCCGGT ATTTTCACAA
CAGCTGAAAG TAAATGAGCT GCGCTGCACT TATAAAAACA ATCCTCAGGG TGTGGAAAGT
CCTGCCCCGG CATTAAGCTG GAAATTGTTT TCAGCGCAAA GAAATGTACT GCAATCGGCT
TATCATATCA TTGTAGCAGA CGATGCTTTA ACCCTTGCAA AAGGCATAGG GAATGTATGG
GACTCGAAAA AAGTGGCTTC TGCCCGGTCT TTGCTGGTTA ACTATAATGG TAAGCCGCTT
ATTTCTGGTA AAACTTATTA CTGGAAAGTA AAAGTTTGGG ATAATAATGG CCTAGCCTCG
GCCTGGTCGG ATACCGCAAC ATGGCAAATG GGGCTGTTAA CCGTGTCCGA CTGGAAAAAT
GCAAAATGGA TAGGCTATGA GAAAATGCCA GATTCGCTGG TTACTATTTT ACCACTTGAT
ACAAAAAAAG ATAAACCTGA GGGTAACAAT ATACAGCCGC TTTTAAGAAA AGAATTTAGG
GTAAACAAAG CAGTAAAAAA AGCCACCATG TTCATTTCCG GTCTTGGACA TTTTGAACTG
CAACTGAATG GCCGGAAAGT AGGTGACCAT TTTTTAGATC CGGGCTGGAC TAAATATGAT
AAAGAAGCTT TATATATACC TTTTGATATC ACGGCACAAT TAAAAGATGG AAACAATGCT
TTGGGTGTTA TGCTGGGCAA TGGGTTTTAT TATATTCCCC CAATTAAGGC GCGTTATAAA
AAGCTGAGGG CATCTTTTGG CTACCCAAAA ATGATTTGCC GTTTGCTGAT TGAATATAAA
GATGGGAGTG TGGCCAACAT CATCAGCGAT GAAAGCTGGA AAACAGCTGC CTCAGCAATC
ACTTTTTCCA GTATTTATGG CGGGGAAGAT TATGATGCCA ACCTGGAGCA AAAGGGCTGG
GACATTCCCG GATTTGATGA TAAACATTGG AAGAGTGCAG TTTCTGTAGG CGGTCCTGCT
TTAACTTCAC AAAAAGCCGA ACCGCTTAAG GTATTTGATC AGTTTACTGC TAAAACCATA
AAGCCGCTTG GGAATGGCGA CTGGGTATAT GACCTTGGAC AAAATGCTTC GGCCATTATT
GAACTAACTG TTAAGGGTAA AAAAGGGGAT ACCGTAAAGA TTATTCCTGC CGAACTGCTT
AAAGCAGATG GTACGGCAAA TCAGCGGGCT ACAGGCAGCC CTACTTATTT CCAGTACATA
TTAAAAGGAG ATGGTGCAGA AACCTGGCGC CCCAGGTTTA TGTATACTGG TTTCAGGTAC
CTGCAGGTAA TTGGCGGGAT ACCGGAAGGA CAGTCTAATA CAACTGGTAA GCCCTCATTA
ATAACCCTGA AAAGTTTGCA TGTACGCAAT GCAGCCGCAA CTGCAGGTTC ATTTGAAAGT
TCAAGTGAAC TGTTCAATAA AACAGATGAT CTGGTCAACT GGGCCATTAA AAGCAATATG
GTTAGCGTAT TTACCGATTG CCCGCACCGG GAAAAACTGG GCTGGCTGGA AGAACTTCAC
CTGATGGGCA GTTCTGTGCG CTACAATTAT GATGCTGCTG CGCTGTTTAA AAAGGCCCTG
CAGGACATGC GGAATTCGCA GACAGCAGAT GGCCTGGTAC CTGAAATTTC GCCCGAATAT
GTAAAATTTG ACTATGGCAA TGGTATGTTC CGCGATTCTC CGGAATGGGG GAGCAGCAGT
ATCCTGGTGC CATGGTATCT TTATGAATGG TACGGGGAAA CACAGGCGCT TGCCGAAAAT
TACGACATGA TGCAGCGTTA TGTGGCTTAC CTGGGTACGA AAGCTAAAAA CAATATCCTT
TCACAAGGGC TGGGTGATTG GTTTGACCTT GGGCCGGAAC GACCTGGGGT TTCTCAGCTT
ACCCCAATGG GGGTAACCGG AACTGCTATT TATTATTACG ACCTGAACGT AATGGAGAAA
ATTGCCCTTT TACTGGGTAA AAATGCTGAT GCCGGCAAAT ATGCAGCATT GGCGATGGAA
GTAAAGAAAT CATTTAACGA TACTTTTTTT AATACAGAGA CCAAACAATA TGCTACAGGC
AGCCAGACAG CCAATGCCAT GGCCGTATAT ATGAACCTGG TTGCCCCTGA ATATAAAGAT
GCCGTAGTCG CCAATCTGGT CAAAGACATC AGAGACCGAA ATAATGGTTT AACCGCCGGG
GATATTGGTT ACCGCTATGT ATTGCGGGTA TTGGAAGCAG AGGGCAGATC GGATGTAATT
TACGATATGA ACAGCCGGAC TGATGTGCCC GGCTACGGTT ATCAGCTGGC ACAAGGTGCA
ACCGCCTTAA CGGAATCATG GGCCGCTTTG CCCACAGTGT CCAATAACCA TTTTATGCTG
GGCCACATTA TGGAGTGGTT TTACAGCGGC ATTGGCGGGA TCCGCCAGGA AAAAGGCGCT
GTTGCTTTTA ACCACATCCG GATTTATCCG GAACCGGTTG GCGACCTGCG TTATGCCAAA
AGCAGTTACC AGTCGCCTTA TGGCGAAATT GCAAGTAACT GGAGAAAAAC CGCTGATGCG
TTTGAACTGG ATGTTATTGT ACCTGCGAAT ACAAAAGCAA CTGTCTATCT GCCTGCTACA
GCAACGCAGC AGGTTAGTGA ATCGGGGCAA AAGATCCGGC CTGCTGGTTT TGAAAAAGGA
AGAGCTGTAG TCCAGGTCGG CTCGGGTAAT TATAAATTTA AAGTACAATA G
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| Protein sequence | MSKLIYFLGL FFFTIPVFSQ QLKVNELRCT YKNNPQGVES PAPALSWKLF SAQRNVLQSA
YHIIVADDAL TLAKGIGNVW DSKKVASARS LLVNYNGKPL ISGKTYYWKV KVWDNNGLAS
AWSDTATWQM GLLTVSDWKN AKWIGYEKMP DSLVTILPLD TKKDKPEGNN IQPLLRKEFR
VNKAVKKATM FISGLGHFEL QLNGRKVGDH FLDPGWTKYD KEALYIPFDI TAQLKDGNNA
LGVMLGNGFY YIPPIKARYK KLRASFGYPK MICRLLIEYK DGSVANIISD ESWKTAASAI
TFSSIYGGED YDANLEQKGW DIPGFDDKHW KSAVSVGGPA LTSQKAEPLK VFDQFTAKTI
KPLGNGDWVY DLGQNASAII ELTVKGKKGD TVKIIPAELL KADGTANQRA TGSPTYFQYI
LKGDGAETWR PRFMYTGFRY LQVIGGIPEG QSNTTGKPSL ITLKSLHVRN AAATAGSFES
SSELFNKTDD LVNWAIKSNM VSVFTDCPHR EKLGWLEELH LMGSSVRYNY DAAALFKKAL
QDMRNSQTAD GLVPEISPEY VKFDYGNGMF RDSPEWGSSS ILVPWYLYEW YGETQALAEN
YDMMQRYVAY LGTKAKNNIL SQGLGDWFDL GPERPGVSQL TPMGVTGTAI YYYDLNVMEK
IALLLGKNAD AGKYAALAME VKKSFNDTFF NTETKQYATG SQTANAMAVY MNLVAPEYKD
AVVANLVKDI RDRNNGLTAG DIGYRYVLRV LEAEGRSDVI YDMNSRTDVP GYGYQLAQGA
TALTESWAAL PTVSNNHFML GHIMEWFYSG IGGIRQEKGA VAFNHIRIYP EPVGDLRYAK
SSYQSPYGEI ASNWRKTADA FELDVIVPAN TKATVYLPAT ATQQVSESGQ KIRPAGFEKG
RAVVQVGSGN YKFKVQ
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