| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2755 |
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| Symbol | |
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| ID | 8253863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3256587 |
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| End bp | 3257738 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644936403 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_003093018 |
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| Protein GI | 255532646 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.353022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAGAC CATTAGAAGG AATTCTTGTT TTAGAGTTTT GCCAGTTCCT GGCGGGGCCA
TCAGCTGGCC TGAAGCTAGC CGATCTGGGT GCACGCGTAA TTAAAATCGA ACGTCCGGTA
AAAGGCGATG CCTGCAGGCA GCTGGCCATT AAAAATCTCT TTGTTGAAGG AGATAGCTTA
CTTTTTCATA CCATTAACCG GAATAAGGAA TCTTATGCGG CAGACCTGAA AAATCCGGAA
GATCTGGATC TGCTTCGTAA ACTGATTGGC AAAGCGGATG TGATGACCCA TAATTTCAGG
CCTGGGGTGA TGGAAAAGAT AGGACTGGAT TATGTTTCGG TACAGCACAT CAATCCAAAA
ATTATATATG CCGCAGTTAC CGGATATGGA ACCGCGGGGC CATGGGCGGC AAAACCCGGG
CAAGACCTGT TGGTACAGTC TGTTTCCGGC TTAACGCAAC TTTCGGGCAG CAGAGACGAG
GGGCCAGTGC CTTTTGGCTT GTCGGTAACC GATATCATGT GTGGCAACCA CCTGACGCAG
GGAATTATAG CCGCTTTGAT CAAGCGGGCC AAAACCAATA AAAGCGTGCT GATAGAGGTA
AGTTTACTGG AATCGGCACT GGATGTGCAG TTTGAGGTAC TGACCACTTA TTTGAATGAT
GGCGGGCAGT TGCCGCAAAG AAGTGCTGTT AAAGGCAGCG CACATGCTTA TTTAAGCGCC
CCTTACGGCA CCTACCAAAC CAAAGACGGA TACCTGGCCC TGGCTATGGG CGATCTGAAC
AAGATCAGCC AGTTGATTGG CTGCGACATC TCGGCCGCAT ACACCAGTGC CGCTGCTTCT
TTTGAAAACA GGGATGCCTT GTTGCTGTTA TTGGGGAAGA CATTCAAAAC CAATACCAAT
GCGCATTGGC TGAGTGTACT GGAGCCGGCT GACGTTTGGT GTGCGGCAGT ACTCAGTTAT
AAAGAGGCTG TTGAAATGGA GGTCTTTAAA AATCAGGAAA TCAGGCAACA GCTGGATTTA
GGGAATGGAC GTACCATAGC TACTACAAGG GCTCCCATCC GTGTAGACGG GCATAAACTT
TATGCGGCCA AAGCCGCACC TAAAATAGGT GCAGACAATG AAAGGATTAA CAAAGAATTT
GATTTAAAAT AG
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| Protein sequence | MKRPLEGILV LEFCQFLAGP SAGLKLADLG ARVIKIERPV KGDACRQLAI KNLFVEGDSL
LFHTINRNKE SYAADLKNPE DLDLLRKLIG KADVMTHNFR PGVMEKIGLD YVSVQHINPK
IIYAAVTGYG TAGPWAAKPG QDLLVQSVSG LTQLSGSRDE GPVPFGLSVT DIMCGNHLTQ
GIIAALIKRA KTNKSVLIEV SLLESALDVQ FEVLTTYLND GGQLPQRSAV KGSAHAYLSA
PYGTYQTKDG YLALAMGDLN KISQLIGCDI SAAYTSAAAS FENRDALLLL LGKTFKTNTN
AHWLSVLEPA DVWCAAVLSY KEAVEMEVFK NQEIRQQLDL GNGRTIATTR APIRVDGHKL
YAAKAAPKIG ADNERINKEF DLK
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