| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2753 |
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| Symbol | |
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| ID | 8253861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3254195 |
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| End bp | 3255427 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644936401 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003093016 |
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| Protein GI | 255532644 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.501272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGG AAGCCATCAG GATAGCAGTG CGCAAATTTG CCCCTTTCGA GGCGGCTATG
CAAAAGGTAT GGGATAGCTA TTGCATGTAT TCAGGTTGTA CCCTGCAGGC AGAACTGGTT
CCGCTCGACC TGCATGAGCT ACATAAGGCT ACTTTGGGCA ATGATGGCCT GAAAAAAGGC
GAATGGGACA TTGCCCACAT CAATACCGAC TGGCTGCTGG AAGGTTATGC CAGCGAGGCC
TTTGAAATAC TGAACCCCCA CCTCGATGCC AATGCCCCCT CGGCTTTTCC GGAGGGCTGG
AGTCCGTCAT TGCTGGCTTT ACAGCAATTT GAAGAACAGG TGGTAGGTTT GCCCTTTCAT
GATGGTCCGG AATGCCTGAG CTACAGAAAA GACTTATTTG ACGATGTTGC AGAACAGCAA
CGTTATCTGC AGCAATACAG AAGGGATTTG AAAATACCTG CAACATGGGA TGAATTCCGG
CAGGTAGCCA GTTTTTTTTA CCGTCCGGAA CAAAACCTCT ATGGCAGTGT ATTTGCGTGC
TATCCTGATG GGCACAATAC GGTGTTTGAT TTCTGCCTGC AATTGTGGAG CCGGGGCGGG
ACATTGCTCG ATGAAGAAGG AAAAATAAAT ATTGATACCA AAGCCGCTGC TGAAGGGCTT
GATTTTTATC GTCAGCTGCT GAAAGACACA AAAGCTGTAC ACCCTGGTTC GGCAAACTAC
GATTCTGTAC AGGCCGGACA GGCTTTTGCC AGAGGTGAAG CTGCACTGAT GATCAACTGG
TTTGGTTTTG CATCGGTATG CGAGGTAGAT GCCGCTTCGG CAGTGAAAGG CAAAGTAGGG
GTAACTTCAT TGCCGGTTTC GGAAAATAAC CTGCCGGCTT CGTTAAATGT TTATTGGGTA
TATACCATAG GCTCGGGTAG TAAACATAAG CAAACTGCTT ATGATTTTCT CCGTTTCGCA
GTAAATGAGG AGAACGATAA GCAGTTGACG CTGGAAGGTG GAATTGGCTG CCGGATTTCA
ACCTGGAAAG ATAGCCTGGT GAACGAGCTG GTACCTTATT ACCATAAACT GGAACAATTG
CATAAAGGGG CAAAAACACT TCCGCAAAAA AGCAATTGGG CAGAAATTGC AGCGATTATT
GATGTGGCGG TATTAAAGGC CTTAAACAGC GAGCTACCTG CTGCAGAAAT TTTGCGCCTC
GCCCAGGAAC AGATCATTTT AATTGACAAA TAG
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| Protein sequence | MNKEAIRIAV RKFAPFEAAM QKVWDSYCMY SGCTLQAELV PLDLHELHKA TLGNDGLKKG
EWDIAHINTD WLLEGYASEA FEILNPHLDA NAPSAFPEGW SPSLLALQQF EEQVVGLPFH
DGPECLSYRK DLFDDVAEQQ RYLQQYRRDL KIPATWDEFR QVASFFYRPE QNLYGSVFAC
YPDGHNTVFD FCLQLWSRGG TLLDEEGKIN IDTKAAAEGL DFYRQLLKDT KAVHPGSANY
DSVQAGQAFA RGEAALMINW FGFASVCEVD AASAVKGKVG VTSLPVSENN LPASLNVYWV
YTIGSGSKHK QTAYDFLRFA VNEENDKQLT LEGGIGCRIS TWKDSLVNEL VPYYHKLEQL
HKGAKTLPQK SNWAEIAAII DVAVLKALNS ELPAAEILRL AQEQIILIDK
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