Gene Phep_2744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2744 
Symbol 
ID8253852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3241160 
End bp3242467 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content42% 
IMG OID644936392 
ProductBile acid:sodium symporter 
Protein accessionYP_003093007 
Protein GI255532635 
COG category[R] General function prediction only 
COG ID[COG0385] Predicted Na+-dependent transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACGT TCCGCAGGTT TTGCCTGCTC GTCGCTTTAG TTGCCCTGGC TGTTTTACTG 
TATGGCCTGC TGCGCTCAGA TGCTGTCTTC TGGCAGCCGG CAGCACTTGT ACTGGCCCTT
AGTACCTCTA TCGGTATGGG GTCGATTGAA TCCCTTAAAA GTTATCAGTA CACGGCATGG
ATTATTACCG CTGTTGTTGC CGGGATGATT TATCCTGAAA AACTGCTTAA CATTGGCGGT
GTAGATATGC GAAATAAATG GCTTATTCTG ATCGTCATTC AACTGGTGAT GTTTGGCATG
GGCATGAAGA TGAGCATTAA AGATTTTACA GGAATTGCAA AGTCTGGAAA AGGTGTTGTT
GTAGGTTTAA TGAGCCATTT TACGGTGATG CCTTTGATGG GATTGCTGTT AACTAAAGTT
TTTCATTTTG ATACAGAAAT TGCGGCAGGA ATTATCCTGA TTGGTTGTTG CTCCAGCGGA
TTGGCATCTA ATGTAATGAC TTACATTGCC AAAGGAAACC TGGTACTGTC TGTAACAGTA
ACTGCTGTTA CCACCATTGC TGCTCCGGTA ATGACCCCTT TTTTAATGAA AATCCTCGCC
GGAACTTTAA TAGAAGTAAA GTTCATTAAT ATGATGATGG AGATCATTAA GATTGTGATT
GTTCCTTTAA GTGCTGCACT TATTCATGAT TATCTTAAAA CGGCATCTCC TGACCAGGCA
AAGAAATTAA ATAGCATAGC ATTGCTTTCT GCAGCATGGT TAGTGATTAA CCTGCTGATT
TGGAAAAGCA CTTTTGCCCC CAATCTATCT GAACCTTTTT TAGAAAGTTT AGAAGTGCTT
AATTTCTTTA CAGGAGCGGT TGTTATCGGT GTACTGTATC ATATGCTTGC CAAGAAATCT
CCTAAAATTG ATGATTTCAT GCCTTACTTT TCTATGGCCG GGATTGTTTA TTTCACCACA
GTTACTACAG CAGCCGGACG TGATCATCTT TTGCAGGTAG GCTTTTTATT GTTCATTGCT
GCTGTTATCC ATAATGGCGC AGGTTATTTT TTCGGATATG CTTTCAGCCG GATAATAGGG
CTTAATAAAG CAGACGCCAG AACGCTGGCA TTTGAAGTTG GATTACAAAA CGGAGGAATG
GCTACAGGGC TGGCCGGTTC TATGGGTAAG CTGGGTACAG TTGGCCTGGC AGCAGCCGTA
TTTAGCCCAT GGATGAACAT CTCGGGCTCA ATACTGGCCA ATTACTGGCG CCGTAAAGCA
TTAAAAGAAG AAGCCGCATC AATTCAATAT AAAAATGAAA AGGATTAA
 
Protein sequence
MYTFRRFCLL VALVALAVLL YGLLRSDAVF WQPAALVLAL STSIGMGSIE SLKSYQYTAW 
IITAVVAGMI YPEKLLNIGG VDMRNKWLIL IVIQLVMFGM GMKMSIKDFT GIAKSGKGVV
VGLMSHFTVM PLMGLLLTKV FHFDTEIAAG IILIGCCSSG LASNVMTYIA KGNLVLSVTV
TAVTTIAAPV MTPFLMKILA GTLIEVKFIN MMMEIIKIVI VPLSAALIHD YLKTASPDQA
KKLNSIALLS AAWLVINLLI WKSTFAPNLS EPFLESLEVL NFFTGAVVIG VLYHMLAKKS
PKIDDFMPYF SMAGIVYFTT VTTAAGRDHL LQVGFLLFIA AVIHNGAGYF FGYAFSRIIG
LNKADARTLA FEVGLQNGGM ATGLAGSMGK LGTVGLAAAV FSPWMNISGS ILANYWRRKA
LKEEAASIQY KNEKD