| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2742 |
|---|
| Symbol | |
|---|
| ID | 8253850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 3237398 |
|---|
| End bp | 3239710 |
|---|
| Gene Length | 2313 bp |
|---|
| Protein Length | 770 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644936390 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003093005 |
|---|
| Protein GI | 255532633 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGATAACA AGAAGCACAT ACAGCCCCTT ATCATTGGTA TCGTTTTATC ATTTCTGAGC
ACATCTGTAC TGGCCCAACA GCCGGCAACA GCTGATCAGA ACCTGGTATG GACCAGCCAG
AGTGAAAATG CAGCCGGATC TATGCCCTGC GGCGGGGGCG ATATTGGCCT CAACGTTTGG
GTAGAAAAGG GCGAACTGCT GTTTTACATC GCCAGGAGTG GAACCTTCGA TGAGAACAAT
ACCTTGTTGA AACTTGGTCG CCTGCGCTTA AAATTAAGTC CCAGTCCCTT TGATGAAGAT
GCAGCTTTTA AACAGGAACT GATCTTAAAA GACGGTTATG TGAAAGTTAA GGGTAAAAAA
GCAGGATTGA CCACCGAAGT GAGGCTCTGG GTGGATGTAT TTAAACCATT GGTTCATCTG
GAAGTAAAAA GCAACCGGAA AACCATCGCC GAAGCCGGGT ATGAAAGCTG GCGATATGCA
GATCGCCTGA CCAAAGGCAA AGAAAACAAC CAGAATTCTT ATAAATGGGC TCCTCAGGGT
GAGGTAAAGA CTTTTAAAGA TAGTATTGCT TTTAAAAATA ATGGATTGCT GTTTTATCAT
CAAAACAAAG CACAGTCGGT ATTCGATATA ACCGTTAAAC AACAAGGCCT GGACAGCATT
AAAGACCAGC TGTTTAACCC GCTTAAGAAC CTGGTGTTTG GCGGAATGAT TTGGGGAACA
GGAATGGTTC CGGCAGGGAA TTACACTGGT ACTTATGCAG GCATTGCTTT TAAGGGCTGG
AAATTGAAAA ACGATAAAGG GCGAACATCG ATCAGCCTGA GCCTGGCCTT ACATACAGAA
GCCACAACCG ATCTCCGGCA TTGGACAGCG GGTTTGAGCC AGACCAGAAA TAAGGCCGCT
GCGAAGGATT TTAACAATAG CATCAAGTGG TGGAATGCCT ATTGGGAACG TAGTTTTATA
GAACTGGAGG GCAACAAGGA TGAAACAGTG GTGCAGGCCG GAAAGAACTA TCAACTGTTC
CGTTATATGC TTGGCTGTAA TGCTTTTGGT ACTTATCCGA CCAAATTTAA CGGAGGTCTT
TTCACCTATG ATCCTGTTTT GGTAGATACC ACCCTGAAAT ATACCCCGGA TTTTAGGAAC
TGGGGCGGGG GAACCCATAC TGCGCAAAAC CAGCGTCTGG TATACTGGCC GATGTTAAAA
AGCGGAGATG CGGAAATGAT GCAGCCTCAA TTCGATTTCT ATACCAGGCT GCTAAAAAAT
GCAGAACTGC GGACAGCATT TTACTGGAAA CATAAAGGCG CAAGCTTTAC TGAACAGCTG
GAGAATTTCG GCTTGCCAAA CCCGGCAGAG TATGGATGGA AGCGTCCTGA AAACTACGAT
AAGGGAATGG AATACAATGC CTGGCTGGAA TATGAATGGG ATACGGTGCT GGAATTTTGT
CTGATGATGC TGGAAACAGA AAGTTATGCC GGCAAAGCAG TAAAACCATA TTTACCCTTT
ATCAGCAGCT GCCTCAGCTT TTTTGATGAA CATTACACTT ACCTGGCCCG GCAAAGGGGC
AGTAAAGCAG TGGATGGCAG CGGACACCTG GTGCTGTACC CGGGATCGGC TGCAGAGACT
TATAAAATGG CCTATAACGC TACTTCTACT ATTGCTGCAT TAAAAACGGT ATTGAGCAGG
CTGCTGCAGG TTAAGGACAT TACAACGGAG CAAAAGCAAG GCTGGGAAGC GATGCTGAAA
CGTATTCCGC CCATCAGCTT CCGGGAATTT AATGGCCATA CTACCATTGC ACCGGCTAAA
GTATGGGAGC GGGTCAACAA TACCGAAAGC CCGCAGTTGT ACCCGGTTTA TCCCTGGGGA
ATTTACGGAA TTGGCCGTCC GGGGCTGGAT ACGGCTATCA ATACCTTCAA CAATGATCCG
GATGTGTTAA AGTTCAGAAG TCATATAGGC TGGAAACAGG ACAATATTTT TGCGGCTAGG
CTGGGTTTAA CAAAAGAAGC TGCTGAACTC ACTTTGGGGA AATTAAAAGA TTCGGGCAGG
AGGTTCCCGG CATTCTGGGG ACCTGGATTT GACTGGGTAC CCGATCACAA CTGGGGCGGT
TCGGGCATGA TCGGCCTGCA GGAAATGCTG TTGCAAAGTA ATGGTAAAGC CATTTATTTG
TTCCCTGCAT GGCCAAAAGA ATGGAATGTC CGGTTCAGGT TGCATGCCTC ATATCAAACC
ATTGTTGAAG CAGAGTTAAA AGACGGCCAG GTAAAATTGC TGAAAGTGAT ACCTGAATCG
AGGAGAAAAG ATATAGAGAT CAGGTTAAAA TAA
|
|---|
| Protein sequence | MDNKKHIQPL IIGIVLSFLS TSVLAQQPAT ADQNLVWTSQ SENAAGSMPC GGGDIGLNVW
VEKGELLFYI ARSGTFDENN TLLKLGRLRL KLSPSPFDED AAFKQELILK DGYVKVKGKK
AGLTTEVRLW VDVFKPLVHL EVKSNRKTIA EAGYESWRYA DRLTKGKENN QNSYKWAPQG
EVKTFKDSIA FKNNGLLFYH QNKAQSVFDI TVKQQGLDSI KDQLFNPLKN LVFGGMIWGT
GMVPAGNYTG TYAGIAFKGW KLKNDKGRTS ISLSLALHTE ATTDLRHWTA GLSQTRNKAA
AKDFNNSIKW WNAYWERSFI ELEGNKDETV VQAGKNYQLF RYMLGCNAFG TYPTKFNGGL
FTYDPVLVDT TLKYTPDFRN WGGGTHTAQN QRLVYWPMLK SGDAEMMQPQ FDFYTRLLKN
AELRTAFYWK HKGASFTEQL ENFGLPNPAE YGWKRPENYD KGMEYNAWLE YEWDTVLEFC
LMMLETESYA GKAVKPYLPF ISSCLSFFDE HYTYLARQRG SKAVDGSGHL VLYPGSAAET
YKMAYNATST IAALKTVLSR LLQVKDITTE QKQGWEAMLK RIPPISFREF NGHTTIAPAK
VWERVNNTES PQLYPVYPWG IYGIGRPGLD TAINTFNNDP DVLKFRSHIG WKQDNIFAAR
LGLTKEAAEL TLGKLKDSGR RFPAFWGPGF DWVPDHNWGG SGMIGLQEML LQSNGKAIYL
FPAWPKEWNV RFRLHASYQT IVEAELKDGQ VKLLKVIPES RRKDIEIRLK
|
|---|
| |