| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2741 |
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| Symbol | |
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| ID | 8253849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3235381 |
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| End bp | 3237300 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936389 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003093004 |
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| Protein GI | 255532632 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.578666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAT CAAGAACCCT TATATTTAGC TTATTGGCGC TGATGGGTAC TGCATCTTCA
GCAGACGCCC AGATTGCTAA AACACCTGCT AAACCTTTAT CCGATCAGAT GGCTGCAACA
GTCATGGAAA TCTGGCCAGA AAGGGCAAAA AAATGGTCTT ATGACCATGG TGTAGTGCAG
GACGGAATGG ATGCTTTGTG GAAAAGATCA GGGAATGCCA GCTATTTCAA GTACATCCAG
AATGACATGG ATGGATTCAT TTCGGCAGAT GGGATAATTG ATACCTATAG CCAGGAGCAT
GTAAATATTG ATAATGTAAA GAATGGTACC GTGCTGCTTG ACCTCTATAA AATAACCGGT
CAGCAAAAAT ACTTTAAAGC GGCCACTACT TTATGGGAAC AGTTAAAGAT ACAACCCAGA
ACCAAACAAG GTAGTTTCTG GCATAAAAAG ATCTATCCAA ACCAGGTATG GCTGGATGGT
CTGTATATGG GGCAGCCTTT CTATGCAGAA TATGCGGCGC TTATCGGAAA TAAGGAAGCT
TTTGACGACA TTGCCAATCA GTTCATCTGG GTAGAACAAA ATACGAGAGA TGCCAGGACC
GGCTTACTGT ACCATGGCTG GGATGAAAGC AAAACAGAGC GCTGGGCAGA TCCAAAAACC
GGTCTTTCTC CGCATATCTG GGCAAGGGCA ATGGGCTGGT ATGCCATGGC ACTGGTCGAA
ACCTTGGACA ATTTTCCTAA AACCCACCCA AAACGTCAGG AAATGATCAA TATCCTGAAC
CGTCTTGCTG CAGCTGTTAA AAACACACAA AATAACAAAA CAGGGGTATG GTATGATATT
TTAGACCAGC CAAACCGTAA AGGCAATTAT TTTGAGTCCT CGGCTTCCAG CATGTTTGTA
TATGCCATCG CCAAAGGTGT TCGTCTGGGT TATCTCCCTG CTTCCTATTT TGTGGTAGCC
AGTAAAGGTT ATAAAGGTAT TCAGCAGGAA TTTATTGAAC AGCGTGCAGA AGGTAAGATC
AATCTGAAAG GGACAGTAAG TGTTTCCGGT TTAGGTGGTA AGCCTTACCG CGATGGCAGT
TATGAGTATT ACATGAGCGA AAAGGTAGTT AGCAATGATC CCAAAGGTGT GGGCGCATTT
TTAATGGCCG CAAACGAAAT GGAAATTGCC GCCCTTCCTA AACCCGGGCT GGGTAAAACC
GTGCTACTCG ATTCATACTT TAACAATGAA AGCCGGAAAG ACCAAAGCGG AAACCTGGTT
TCCTGGCATT ATAAATGGGA TGAACTGGCC AATGGCGGCT TTTCTATGTG GGCAGATCAG
TTTAACAATG CAGGGTTTAA AACTGCAACT TTAAAAGCGG CACCTACGGC AGCCAATTTG
AAAAATGCTT CGGTGTATAT CATTGTTGAT CCGGATACGG AAAAAGAAAC GGAAAAACCG
AATTTTGTTG CCCAAAATGA CATTAAAGCA ATTGCTGAAT GGGTTAAGGG TGGTGGCATA
TTGGTATTGA TGGCCAATGA TACCGGTAAT GTGGAACTGG ACCATTTTAA CCAGCTGGCC
AAAACTTTTG GTATTGAATT TAACAAGGAC AGTAAAGGCA GGGTAGTAAA AAGCCAGTTT
GAGATGGGTA AGGTAATGGT ACCGGCAGGC AACGAAATAT TTAAAACCGC AAAGCAATTG
TACGTCAAAG AATACAGCAG CCTGAAATTA ACCACTGCTG CAAAAGCAGT GCTCAAGGAT
AAGGATGGCG ATAATGTAAT GGCCATAGCT AAATATGGTA AAGGGGCGGT TTTTGCCATT
GGCGATCCAT GGTTGTACAA TGAATATGTA GATGGCAGAA AATTACCTGC AGACTATCAG
AATTTCGAAG CTGGCCAGGA TCTGGTGAAC TGGATCGGGA AGCAGCTGCT AAAAAAATAA
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| Protein sequence | MNKSRTLIFS LLALMGTASS ADAQIAKTPA KPLSDQMAAT VMEIWPERAK KWSYDHGVVQ
DGMDALWKRS GNASYFKYIQ NDMDGFISAD GIIDTYSQEH VNIDNVKNGT VLLDLYKITG
QQKYFKAATT LWEQLKIQPR TKQGSFWHKK IYPNQVWLDG LYMGQPFYAE YAALIGNKEA
FDDIANQFIW VEQNTRDART GLLYHGWDES KTERWADPKT GLSPHIWARA MGWYAMALVE
TLDNFPKTHP KRQEMINILN RLAAAVKNTQ NNKTGVWYDI LDQPNRKGNY FESSASSMFV
YAIAKGVRLG YLPASYFVVA SKGYKGIQQE FIEQRAEGKI NLKGTVSVSG LGGKPYRDGS
YEYYMSEKVV SNDPKGVGAF LMAANEMEIA ALPKPGLGKT VLLDSYFNNE SRKDQSGNLV
SWHYKWDELA NGGFSMWADQ FNNAGFKTAT LKAAPTAANL KNASVYIIVD PDTEKETEKP
NFVAQNDIKA IAEWVKGGGI LVLMANDTGN VELDHFNQLA KTFGIEFNKD SKGRVVKSQF
EMGKVMVPAG NEIFKTAKQL YVKEYSSLKL TTAAKAVLKD KDGDNVMAIA KYGKGAVFAI
GDPWLYNEYV DGRKLPADYQ NFEAGQDLVN WIGKQLLKK
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