| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2734 |
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| Symbol | |
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| ID | 8253842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3228523 |
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| End bp | 3229038 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644936382 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003092997 |
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| Protein GI | 255532625 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.668835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACAG CGCCATTAGA TTTCAACAAT CAGTTATTTT CGTTCAGGGA CAGTTTACAA
GGATTCGCAT TTTCTTTCAC ACGAAACGAA GAGGATGCTG CCGATTTGGT CCAGGACACA
TTGCTTAAAG CGATGCGGTA CGCACAAAGT TTTCAGGAGG GAACAAATTT AAAAAGCTGG
CTGTTTATTA TCCTTAAAAA TACGTTCATC AATAATTACA GGAGGAAGGG TAAATTTAAT
TCTTACATGG ATGAAGCCAG CAGTATAGCC ATGAATGAAT CCTATTTTAA TCTAACTTAC
AATACCGGTG AAAGTAATTG TTCGGTAGAA GATATTCATA AAGCACTGAA AAAACTTTCC
CAGGGGTATT ATCTCCCATT TATTAAATAT TTTGAGGGTT ATAAATATCA TGAGATCGCT
GAGGAATTAA ATATTCCTAT TGGAACGGTT AAAACCAGAA TCCATATGGC CAGGATGATG
CTGAAGAAAA ATTTGAGGAT GTACAGCGAA AGGTAG
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| Protein sequence | MKTAPLDFNN QLFSFRDSLQ GFAFSFTRNE EDAADLVQDT LLKAMRYAQS FQEGTNLKSW
LFIILKNTFI NNYRRKGKFN SYMDEASSIA MNESYFNLTY NTGESNCSVE DIHKALKKLS
QGYYLPFIKY FEGYKYHEIA EELNIPIGTV KTRIHMARMM LKKNLRMYSE R
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