| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2730 |
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| Symbol | araD |
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| ID | 8253838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3223186 |
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| End bp | 3223884 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936378 |
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| Product | L-ribulose-5-phosphate 4-epimerase |
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| Protein accession | YP_003092993 |
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| Protein GI | 255532621 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.29753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTATTT ATCAGGATAT CAAAGAAAAA GCTTACCTGG CAAACATGCA ACTGCCCAAA
CTGGGACTGG TGCTGTTCAC TTTTGGTAAT GCAAGTGCGG CCGACAGGGC CAAAGGTGTT
TTTGCCATTA AGCCAAGCGG GGTTGCTTAT GAGGAATTAA GTCCGGAAAA AATGGTGATC
GTTGATTTTG AAGGCCATAC GGTTGAAGGC AACTTACGGC CTTCATCAGA TACCCTGACC
CATGCCGTTC TTTACAAACA CTGGGAAGAA ATTGGGGGCA TTGTACATAC CCATTCTACA
TATGGAACAG CCTGGGCACA ATCGCAGCGT GCCATCCCCA TTTATGGAAC CACACATGCC
GATCACCTTA CCGTAGATAT TCCATGTGCC CCCCCTATGC AGGATGACAG GATTGAAGGA
AACTATGAGT ATGAGACCGG TTTCCAGATC ATGAACCATT TTAAAGCAGC CGGCCTGAGC
TATAAAGAAG TAGAAATGGT ACTTGTAGGC AACCATGCGC CATTTACCTG GGGTAAAACG
GCCGAGAAGG CAGTTTACAA TAGCGCTGTG CTGGAAGAAG TAGGCAGAAT GGCCCTGCTT
ACAGAGCAGA TCAGAAAAGA CGTACCCAAA TTAAAAGAAG CACTGATCAA AAAGCACTAT
GACAGAAAAC ATGGTACTGA TGCATATTAC GGACAATAA
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| Protein sequence | MSIYQDIKEK AYLANMQLPK LGLVLFTFGN ASAADRAKGV FAIKPSGVAY EELSPEKMVI
VDFEGHTVEG NLRPSSDTLT HAVLYKHWEE IGGIVHTHST YGTAWAQSQR AIPIYGTTHA
DHLTVDIPCA PPMQDDRIEG NYEYETGFQI MNHFKAAGLS YKEVEMVLVG NHAPFTWGKT
AEKAVYNSAV LEEVGRMALL TEQIRKDVPK LKEALIKKHY DRKHGTDAYY GQ
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