Gene Phep_2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2728 
Symbol 
ID8253836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3220701 
End bp3221411 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content41% 
IMG OID644936376 
ProductNUDIX hydrolase 
Protein accessionYP_003092991 
Protein GI255532619 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.147262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAT ACACTGATCA AAGCCGGTTT TTAATTGCTG TTGACTGTAT TGTATTTGGC 
TTTGACGGGG AACATTTAAA AATCCTGCTG ATTAAAAGAG GATTTGAGCC CGAAAAGGAT
AAATGGAGTT TAATGGGTGG CTTTGTGACT CCGGAAGAGA GTCTGGATGA TGCAGCCAAC
AGGGTACTGA CCCAGCTTAC AGGACTGAAC GGTGTTTACC TGGAACAAAT TCAGGCTTAC
GGAAACCCTT TAAGGGACCC GATAGAAAGG ACGCTTTCTG TAACTTATTT TGCACTGATA
GACATCCATA AATATGAAGC ACAGCTGAAC GATCAGTACC ATGCAGAATG GTTTCTGTTA
AAAGATGCAC CACCATTGAT TTTTGACCAC AATGAAATGG TAGAAACGGC CAAAAAGAAA
ATAAGGTATA AAGCTGCCCT GCACCCTATC CTTTTTGAGT TGCTGCCCAA AAAATTTACC
ATTCCACAAT TGCAGAACCT GTATGAAGAC GTGTACAATA CCCAGATTGA CAACAGGAAC
TTCATCAGGA AGCTGACAGC CACCAAACTG CTCATTAAAC TTGCCGAGAA AGATAAATCC
GGTTCCAAAA AAGGGGCTTT CTATTTTAAA CTGGACAAGA AAAAATATCA GGCCAACTTC
CAGGCCTTCT TAAACTTCAT TCCAAAACCC GATAAACTAA TAGCTGTATA G
 
Protein sequence
MKRYTDQSRF LIAVDCIVFG FDGEHLKILL IKRGFEPEKD KWSLMGGFVT PEESLDDAAN 
RVLTQLTGLN GVYLEQIQAY GNPLRDPIER TLSVTYFALI DIHKYEAQLN DQYHAEWFLL
KDAPPLIFDH NEMVETAKKK IRYKAALHPI LFELLPKKFT IPQLQNLYED VYNTQIDNRN
FIRKLTATKL LIKLAEKDKS GSKKGAFYFK LDKKKYQANF QAFLNFIPKP DKLIAV