Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2728 |
Symbol | |
ID | 8253836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3220701 |
End bp | 3221411 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644936376 |
Product | NUDIX hydrolase |
Protein accession | YP_003092991 |
Protein GI | 255532619 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.147262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAT ACACTGATCA AAGCCGGTTT TTAATTGCTG TTGACTGTAT TGTATTTGGC TTTGACGGGG AACATTTAAA AATCCTGCTG ATTAAAAGAG GATTTGAGCC CGAAAAGGAT AAATGGAGTT TAATGGGTGG CTTTGTGACT CCGGAAGAGA GTCTGGATGA TGCAGCCAAC AGGGTACTGA CCCAGCTTAC AGGACTGAAC GGTGTTTACC TGGAACAAAT TCAGGCTTAC GGAAACCCTT TAAGGGACCC GATAGAAAGG ACGCTTTCTG TAACTTATTT TGCACTGATA GACATCCATA AATATGAAGC ACAGCTGAAC GATCAGTACC ATGCAGAATG GTTTCTGTTA AAAGATGCAC CACCATTGAT TTTTGACCAC AATGAAATGG TAGAAACGGC CAAAAAGAAA ATAAGGTATA AAGCTGCCCT GCACCCTATC CTTTTTGAGT TGCTGCCCAA AAAATTTACC ATTCCACAAT TGCAGAACCT GTATGAAGAC GTGTACAATA CCCAGATTGA CAACAGGAAC TTCATCAGGA AGCTGACAGC CACCAAACTG CTCATTAAAC TTGCCGAGAA AGATAAATCC GGTTCCAAAA AAGGGGCTTT CTATTTTAAA CTGGACAAGA AAAAATATCA GGCCAACTTC CAGGCCTTCT TAAACTTCAT TCCAAAACCC GATAAACTAA TAGCTGTATA G
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Protein sequence | MKRYTDQSRF LIAVDCIVFG FDGEHLKILL IKRGFEPEKD KWSLMGGFVT PEESLDDAAN RVLTQLTGLN GVYLEQIQAY GNPLRDPIER TLSVTYFALI DIHKYEAQLN DQYHAEWFLL KDAPPLIFDH NEMVETAKKK IRYKAALHPI LFELLPKKFT IPQLQNLYED VYNTQIDNRN FIRKLTATKL LIKLAEKDKS GSKKGAFYFK LDKKKYQANF QAFLNFIPKP DKLIAV
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