| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2717 |
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| Symbol | |
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| ID | 8253825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3199322 |
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| End bp | 3202459 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936365 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_003092980 |
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| Protein GI | 255532608 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.945973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC TCAAAACCTA TGTTGCATTT TTATTCTTGT GGCTATTTGG CTTTGTCCAG
CTTGCTGTTG CCCAGAAAGC ACCCTGGCTT GATGAAAAAA ACAGTGAAGA AAACAGGCTG
CCTATGCATG CCGCTTACTT TGTTTATGAA AACGAAGCAG TGGCCAAATT GGGTGACTGG
AAAAAATCAA AAAATTACAT TAATTTAAAT GGCGCCTGGA AATTTAAGTT TGTTGATTGT
CCTGCCGCCT TACCGGAAAA TTATTATGCC CTTAATTTTA AAGACCAGGA TTGGGATGTG
TTTAAAATTC CGGCCACCTG GGAAGTAAAT GGCTATGGAT ATCCAATTTT TGTAAACTAT
CCGAATGAAT TTCGTGACCG GATGAAACCC AATCCTCCAC TGGTACCAAT GGATTTTAAC
CCCACGGGCG TTTACCGCAG GCAAATTGAA ATCGGTAAAG ACTTTGCCGG AAAGCAAGTT
ATCTTACACA TTGGCGCAGC AAAATCGAAC ATCCAGATTT GGGTGAACGG AAAATATTCC
GGCTATGGCG AAGATGGAAA ACTACCTTCA GAATTTGACA TCACCAAATT GGTAAAACAG
GGCCAAAATT TAATTGTGCT TAAAGTAATG CGCTGGAGCG ACGGTACTTA CTTAGAAGAT
CAGGACATGT GGCGGGTAAG TGGTATTGTC CGCGATTGTT ACCTGCTGGC CAGGAACACC
ATCCATTTAG CAGACATTGA AATTATGCCG GATTTAGATG CAGCCTATCA GAACGGATTG
CTGCATGTTA AAGTTTCACT CAGTACACCG GCAAAGGTTA CTGCACTTTT CGAATTGCGT
GATGGCGAAA AAATAGTGGC CAAAAAAAAT ATTGCCTTTG ATGGTAAGCG CAACAGGGCA
ATTGATGTGA GCGTAAACGA TCCCATATTA TGGAATGCAG AAAATCCATA TCTATACCAG
GCAACCTTCA AATTATTGGA CCGGTCAGGC AAAATTACCG AAGTTATTTC ACAGAAGGTA
GGCTTTAGAA AGGTAGAAAT GAAGAATGGG CTGTTATTGG TAAATGGAAA GCCAATTCTG
ATCAAAGGGG TAAACCGGCA CGAAATAGAC CCGGTTTCCG GGCAAACGAT CTCGAAAGAA
ATTATGTTGC AGGACATCAG GCTGATGAAA AAATTTAATA TCAATGCAGT AAGAACAAGC
CATTACCCGA ATGACCCGTA TTGGTACGAA CTCTGTGATG AATATGGCAT TTACATGGTG
GCAGAAGCCA ATATAGAATC ACATGGCGTG GGCCCGCTGG CATACCATGA ATTCAACCTT
ACAAAAGGGC TGGGTAATGT TCCATCCTGG CGCGATGCCC ATATGCTTCG CTTAAAAAGA
GCAGTTGAGC GTGATAAGAA CCATCCTTCA ATTGTCATAT GGAGCCTGGG CAATGAAGCA
GGGGCAGGCT ATAATTTTTA TGAAACCAGA CAGTGGCTGA AACAACGGGA TACCACCCGG
CTGGTGCAAT ACGAAGGCGC CATTATCGAT TATACCAGGT ACATTACCGA TTGGAATACC
GACATCATTA ACCCCATGTA CCCAGAGCCA GACAACATGC TGGCCTATGC AAAAAGTACA
CCTCATCCTG CAAAACCTTT CATTATGTGC GAATATGCCC ATTCTATGGG AAATTCGTTG
GGTAATTTTA AAGATTATTG GGATCTGATC AGAGGCAACC CTCATGCTTT TCAGGGTGGT
TTCATTTGGG ATTTTGTAGA CCAGGGCCTG CTTAAAATCA CGGCACAAGG TGATACGATC
TATACCTATG GAGGAGATTA CGGGCCGCCA ACAGCGCCAA GCGATAACAA TTCAATGAGC
GATGGCGTGT TCCAATCCAA CAGAAAACCC GATCCTGAGG CCTGGGAAAT GAAAAAAGTT
TATCAGGACA TTCACAGTAC CTGGATGGGG AACAACAAAG TTGAAATTTA TAACGAACGC
TTTTTTACTG ATTTAGCTGA TGTAACCTTA AAATGGGAAT TAATGGCAGA TGGGAAAATC
GTCCAAAACG GCGAAGTAGC ATCACTTCAT GTGCTGCCGC AAAAAAAAGA GACCATTGCC
CTGCCACTGC AGATGCAAAC AGGGGAAGTT TTTTTAAACC TGACTTATCT AACAAAGCGG
GCTAAAAACC TTGTTCCGGC TGCCCATATC CTGGCCTGGG AACAATTGCC GGTTTCAGGC
GGCCAGCTGC AGGCAGTGCA GGTACGTGGA ACCGAAAAGC TAAACTACAC AAAAGAAGCA
GACGCCCTAT CAGTTTCTTC TGCGAATGCC GCACTCAGGT TTAATAAAAA AACAGGCCTG
CTGAGCCAGT ATGCCGTAAA TGGAGTAAAT TACCTGGCAA CAGCAACAAC CCTCGAACCT
GATTTCTGGC GTGCACCAAC CGATAACGAC ATGGGCGCCA ATTTGCAGAA AACGCTTAAA
GATTGGAAAA TTGCCATGAA AAATATGCAG TTAACGGCTT TTGATGTCAA CCAAAACAAC
AACATAGTTA CCGTAAAAGC CAGCTACAAC CTGGCCGAGG TTATGGCTAA ACTGAACATC
AGCTATCAAA TTAATGCCAC CGGAGAAATA CTGGTAAAGC AGGACTTAAC AGCCGATACC
ACACAAAAAA CAGGCCCGAT GCTGTTTAAA TTTGGTATGA AAATGATTCT TCCCCCTGGT
TTTGAAAATT TAGATTATTA TGGAAGAGGA CCGTTTGAAA ACTATCAGGA TCGTTATACG
GCTGCATTGA TTGGTATTTA TCACCAATCC GTAAAGGCAC AATTTAATGC CTACACCAGG
CCTCAGGAAA CCGGAACCAA AACCGATGTC AGGTGGCTTG AACTTAAAAA TGAACAAGGA
AAAGGGATCA GGGTTGAGGC AGCAGTGCCC TTAACTACAA GCGCTTTACA TTTTTATACT
GAAGATCTTG ATGATGGTGA GGAAAAGCAC CAGCGCCATT CAGGAGAACT TAAACCAAGA
AAAGAGACAC AACTGAATAT CGATTTTAAA CAAATGGGTG TTGGAAGTGT AAACAGCTGG
GGCGAATTGC CGCTAAAACA ATATTTGTTG CCTTACCAGA ACTATAGCTA CCAGTATAAG
ATAATTCCTT TAAATTAG
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| Protein sequence | MKNLKTYVAF LFLWLFGFVQ LAVAQKAPWL DEKNSEENRL PMHAAYFVYE NEAVAKLGDW
KKSKNYINLN GAWKFKFVDC PAALPENYYA LNFKDQDWDV FKIPATWEVN GYGYPIFVNY
PNEFRDRMKP NPPLVPMDFN PTGVYRRQIE IGKDFAGKQV ILHIGAAKSN IQIWVNGKYS
GYGEDGKLPS EFDITKLVKQ GQNLIVLKVM RWSDGTYLED QDMWRVSGIV RDCYLLARNT
IHLADIEIMP DLDAAYQNGL LHVKVSLSTP AKVTALFELR DGEKIVAKKN IAFDGKRNRA
IDVSVNDPIL WNAENPYLYQ ATFKLLDRSG KITEVISQKV GFRKVEMKNG LLLVNGKPIL
IKGVNRHEID PVSGQTISKE IMLQDIRLMK KFNINAVRTS HYPNDPYWYE LCDEYGIYMV
AEANIESHGV GPLAYHEFNL TKGLGNVPSW RDAHMLRLKR AVERDKNHPS IVIWSLGNEA
GAGYNFYETR QWLKQRDTTR LVQYEGAIID YTRYITDWNT DIINPMYPEP DNMLAYAKST
PHPAKPFIMC EYAHSMGNSL GNFKDYWDLI RGNPHAFQGG FIWDFVDQGL LKITAQGDTI
YTYGGDYGPP TAPSDNNSMS DGVFQSNRKP DPEAWEMKKV YQDIHSTWMG NNKVEIYNER
FFTDLADVTL KWELMADGKI VQNGEVASLH VLPQKKETIA LPLQMQTGEV FLNLTYLTKR
AKNLVPAAHI LAWEQLPVSG GQLQAVQVRG TEKLNYTKEA DALSVSSANA ALRFNKKTGL
LSQYAVNGVN YLATATTLEP DFWRAPTDND MGANLQKTLK DWKIAMKNMQ LTAFDVNQNN
NIVTVKASYN LAEVMAKLNI SYQINATGEI LVKQDLTADT TQKTGPMLFK FGMKMILPPG
FENLDYYGRG PFENYQDRYT AALIGIYHQS VKAQFNAYTR PQETGTKTDV RWLELKNEQG
KGIRVEAAVP LTTSALHFYT EDLDDGEEKH QRHSGELKPR KETQLNIDFK QMGVGSVNSW
GELPLKQYLL PYQNYSYQYK IIPLN
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