Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2708 |
Symbol | |
ID | 8253816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3181969 |
End bp | 3183858 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644936356 |
Product | hypothetical protein |
Protein accession | YP_003092971 |
Protein GI | 255532599 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0314889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.739389 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAA TTAACCTGTT GCTTTCGCTG CTGCTATTGG TAGCGGCGAA AGCCTTTTCG CAAACTGCGG GTACAAGTGT CCAAAGCCCC GATCAGAAAA TAACATTTGC GCTTTCTGTA CAAAACAATA AACTGAACTA CTCTATCAGC AGCAATAAAG ATAAGGTAAT CTCCTCTTCA GCCCTCAGCA TGTCGGTTGA TGGTACAGTG ATTACCGATG ATGTTACCCT AGGCAAAGGC GAAACTTACC GTCAGGACGA AACCTATCCC TGGTATGGGG CACATTCAAC TGTCCGGAAC CATTACAATG GAGCAAAAAT AGCTCTCACA AAAGGCAGTT TAAACTACAT TTTAGATGTC CGTGTTTTTA ACGATGGTGC AGCCTTCCGC TTCATTGTAC CCGGAAAGGA AAATGTTAAA CGGATTGCCG ATGAAGCTAC GGTATTTACC TTACCTGCAG GTACAACAGC CTGGTACCAT GATCTTAACA TGCATTATGA AGGAGTATAT GAAAAGAAAG GCCTGGATAC GGTTAAAGTT GGCGAATGGG CAGCACCATC CGTAACATTT CAATTGCCCG GCAGCAAAAC ATACCTGGCC ATTACCGAGG CCGACCTTAA AAACTATGGG GGCATGGCCC TGCAAACAGA CGGGAAAAGA GGAATGCTGC TCAGGCTGCC GCAACACCAG CCAACATCTT ATCCCTATAA ATTGCGCTAC AGCCCCGAAG ATACTTTAAG GCTGTCCAAA CCTGCAGCCA TAAGCGGAAC CATCAGTACC CCATGGCGGG TGGTAATGAT TGCCAGGGAT CTGAATGCCC TGGTAAACAA TGATATGGTG CATAACCTTT GTCCCCCGCC CGATAAAAAC CTGTTTCCTC AGGGCATTAA AACCGAATGG ATAAAACCGG GTCCTGCCGT ATGGAAATAC CTGGACGATG GGGGCGAAAG TACCGTAGCC AATATGAAAG AGTTTTCCAG AATGGCAGCC GAACTGGGTT TTAAGCACAA TATCCTGGAA GGTTTCTGGC GCAAATGGAG CGATGACGAG CTCAAAGACC TGGTCAGTTA CTCCCGTAAA AAAGGGGTAG AGATCTGGCT TTGGGAACAT TCCAAAAACC TTTGGGACGA ACGCGCAAGA CATGCCTTTT TTAAACGCTG CCACGATCTG GGAATTGGTG GTTTAAAGCT CGATTTCTTT GATCATGAAG CCAAAGATGT GGTAGACCTG TATCAGGACA TCCTGAAAGA AACCGCAGAA CTGCAATTAT TGGTCGACTT TCATGGTGCC AATAAACCAA CCGGACAAGA GCGCAGCTGG CCAAATGAAC TGACCCGCGA AGCGGTTAAA GGTATGGAAG CCAGTAAGCT GGCCGATAGG GCAGGACACA ATGTAACCTT GCCTTTTACC CGTTTTGTTG CAGGCCATGC CGAATATACA CCGGTGCATT TCGGTGAACG CCGGAAAAAT ACCAGCTGGA CACACCAGAT TGCTACAGCA GCTATCTTTA GTGCGCCATT GCTTACCTAT GCCGCCAGTC CGCAACACCT GCTCAGCAAC CCTGCGGTAG CCATGATCAA AAGCATCCCA TCGGTATGGG ATGAAACGAT CGTATTGCCC GGTTCGGCCA TAGGCGAAGC AGCAGCATAC GCACGCAGAA AAGGCAATAC CTGGTTTCTG GCTGTCATCA ATGGTACAAA AACACTGACA CTGGACATAT CCCTGTCGTT TTTGGGCGAA GGGACATTCG AAAGCATGGA AGTACGTGAT GTGAAAAATG AACCTGCAAG TTTAAAAGTA ACAACGGGGG TAAACAGTAA AAAGGACAGG ATACTCCTTA ACCTGGAAGG GGGTGGTGGC TTTATAGCCA GGTTTACCAA ACAACCTTAG
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Protein sequence | MAKINLLLSL LLLVAAKAFS QTAGTSVQSP DQKITFALSV QNNKLNYSIS SNKDKVISSS ALSMSVDGTV ITDDVTLGKG ETYRQDETYP WYGAHSTVRN HYNGAKIALT KGSLNYILDV RVFNDGAAFR FIVPGKENVK RIADEATVFT LPAGTTAWYH DLNMHYEGVY EKKGLDTVKV GEWAAPSVTF QLPGSKTYLA ITEADLKNYG GMALQTDGKR GMLLRLPQHQ PTSYPYKLRY SPEDTLRLSK PAAISGTIST PWRVVMIARD LNALVNNDMV HNLCPPPDKN LFPQGIKTEW IKPGPAVWKY LDDGGESTVA NMKEFSRMAA ELGFKHNILE GFWRKWSDDE LKDLVSYSRK KGVEIWLWEH SKNLWDERAR HAFFKRCHDL GIGGLKLDFF DHEAKDVVDL YQDILKETAE LQLLVDFHGA NKPTGQERSW PNELTREAVK GMEASKLADR AGHNVTLPFT RFVAGHAEYT PVHFGERRKN TSWTHQIATA AIFSAPLLTY AASPQHLLSN PAVAMIKSIP SVWDETIVLP GSAIGEAAAY ARRKGNTWFL AVINGTKTLT LDISLSFLGE GTFESMEVRD VKNEPASLKV TTGVNSKKDR ILLNLEGGGG FIARFTKQP
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