Gene Phep_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2708 
Symbol 
ID8253816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3181969 
End bp3183858 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content48% 
IMG OID644936356 
Producthypothetical protein 
Protein accessionYP_003092971 
Protein GI255532599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0314889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.739389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAA TTAACCTGTT GCTTTCGCTG CTGCTATTGG TAGCGGCGAA AGCCTTTTCG 
CAAACTGCGG GTACAAGTGT CCAAAGCCCC GATCAGAAAA TAACATTTGC GCTTTCTGTA
CAAAACAATA AACTGAACTA CTCTATCAGC AGCAATAAAG ATAAGGTAAT CTCCTCTTCA
GCCCTCAGCA TGTCGGTTGA TGGTACAGTG ATTACCGATG ATGTTACCCT AGGCAAAGGC
GAAACTTACC GTCAGGACGA AACCTATCCC TGGTATGGGG CACATTCAAC TGTCCGGAAC
CATTACAATG GAGCAAAAAT AGCTCTCACA AAAGGCAGTT TAAACTACAT TTTAGATGTC
CGTGTTTTTA ACGATGGTGC AGCCTTCCGC TTCATTGTAC CCGGAAAGGA AAATGTTAAA
CGGATTGCCG ATGAAGCTAC GGTATTTACC TTACCTGCAG GTACAACAGC CTGGTACCAT
GATCTTAACA TGCATTATGA AGGAGTATAT GAAAAGAAAG GCCTGGATAC GGTTAAAGTT
GGCGAATGGG CAGCACCATC CGTAACATTT CAATTGCCCG GCAGCAAAAC ATACCTGGCC
ATTACCGAGG CCGACCTTAA AAACTATGGG GGCATGGCCC TGCAAACAGA CGGGAAAAGA
GGAATGCTGC TCAGGCTGCC GCAACACCAG CCAACATCTT ATCCCTATAA ATTGCGCTAC
AGCCCCGAAG ATACTTTAAG GCTGTCCAAA CCTGCAGCCA TAAGCGGAAC CATCAGTACC
CCATGGCGGG TGGTAATGAT TGCCAGGGAT CTGAATGCCC TGGTAAACAA TGATATGGTG
CATAACCTTT GTCCCCCGCC CGATAAAAAC CTGTTTCCTC AGGGCATTAA AACCGAATGG
ATAAAACCGG GTCCTGCCGT ATGGAAATAC CTGGACGATG GGGGCGAAAG TACCGTAGCC
AATATGAAAG AGTTTTCCAG AATGGCAGCC GAACTGGGTT TTAAGCACAA TATCCTGGAA
GGTTTCTGGC GCAAATGGAG CGATGACGAG CTCAAAGACC TGGTCAGTTA CTCCCGTAAA
AAAGGGGTAG AGATCTGGCT TTGGGAACAT TCCAAAAACC TTTGGGACGA ACGCGCAAGA
CATGCCTTTT TTAAACGCTG CCACGATCTG GGAATTGGTG GTTTAAAGCT CGATTTCTTT
GATCATGAAG CCAAAGATGT GGTAGACCTG TATCAGGACA TCCTGAAAGA AACCGCAGAA
CTGCAATTAT TGGTCGACTT TCATGGTGCC AATAAACCAA CCGGACAAGA GCGCAGCTGG
CCAAATGAAC TGACCCGCGA AGCGGTTAAA GGTATGGAAG CCAGTAAGCT GGCCGATAGG
GCAGGACACA ATGTAACCTT GCCTTTTACC CGTTTTGTTG CAGGCCATGC CGAATATACA
CCGGTGCATT TCGGTGAACG CCGGAAAAAT ACCAGCTGGA CACACCAGAT TGCTACAGCA
GCTATCTTTA GTGCGCCATT GCTTACCTAT GCCGCCAGTC CGCAACACCT GCTCAGCAAC
CCTGCGGTAG CCATGATCAA AAGCATCCCA TCGGTATGGG ATGAAACGAT CGTATTGCCC
GGTTCGGCCA TAGGCGAAGC AGCAGCATAC GCACGCAGAA AAGGCAATAC CTGGTTTCTG
GCTGTCATCA ATGGTACAAA AACACTGACA CTGGACATAT CCCTGTCGTT TTTGGGCGAA
GGGACATTCG AAAGCATGGA AGTACGTGAT GTGAAAAATG AACCTGCAAG TTTAAAAGTA
ACAACGGGGG TAAACAGTAA AAAGGACAGG ATACTCCTTA ACCTGGAAGG GGGTGGTGGC
TTTATAGCCA GGTTTACCAA ACAACCTTAG
 
Protein sequence
MAKINLLLSL LLLVAAKAFS QTAGTSVQSP DQKITFALSV QNNKLNYSIS SNKDKVISSS 
ALSMSVDGTV ITDDVTLGKG ETYRQDETYP WYGAHSTVRN HYNGAKIALT KGSLNYILDV
RVFNDGAAFR FIVPGKENVK RIADEATVFT LPAGTTAWYH DLNMHYEGVY EKKGLDTVKV
GEWAAPSVTF QLPGSKTYLA ITEADLKNYG GMALQTDGKR GMLLRLPQHQ PTSYPYKLRY
SPEDTLRLSK PAAISGTIST PWRVVMIARD LNALVNNDMV HNLCPPPDKN LFPQGIKTEW
IKPGPAVWKY LDDGGESTVA NMKEFSRMAA ELGFKHNILE GFWRKWSDDE LKDLVSYSRK
KGVEIWLWEH SKNLWDERAR HAFFKRCHDL GIGGLKLDFF DHEAKDVVDL YQDILKETAE
LQLLVDFHGA NKPTGQERSW PNELTREAVK GMEASKLADR AGHNVTLPFT RFVAGHAEYT
PVHFGERRKN TSWTHQIATA AIFSAPLLTY AASPQHLLSN PAVAMIKSIP SVWDETIVLP
GSAIGEAAAY ARRKGNTWFL AVINGTKTLT LDISLSFLGE GTFESMEVRD VKNEPASLKV
TTGVNSKKDR ILLNLEGGGG FIARFTKQP