Gene Phep_2702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2702 
Symbol 
ID8253810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3174526 
End bp3175698 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content46% 
IMG OID644936350 
Producthypothetical protein 
Protein accessionYP_003092965 
Protein GI255532593 
COG category[S] Function unknown 
COG ID[COG4299] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.523267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTTA AACCCGGCAT CAGATTCCAG GCGGTTGATG TGTTAAGGGC ACTGACCATG 
TTCCTGATGA TTTTTGTAAA CGATGTGGGG AGTGTGAAAT ACCTGCCGCA TTGGGTAGAT
CATGTGGAAG CAGATGTAGA TGGGATGGGT TTTGCAGATA CGATATTTCC GGCATTTTTA
TTTATTGTAG GGCTTTCACT TCCATTTGCG CTGCAAAGCA GGATGAACAA GGGGAAGTCT
TTTTTGTCCA TTTCCCTTTA TATTGTTTTA AGATCGGCCG CACTTATTGT AATGGGCTTT
TTTCACGTCA ATTCTGGTGC ATACAGCGAG GCGGCATTGC TGCCCCGTCC GGTCTGGACA
ATCCTGACCA CCTTCAGTTT TTTCCTGATC TGGATGGATT ATCCCAAGCA ATGGTCCCTT
CGTAAAAAGA ACCTGCTGGT GACGCTGGGA ATTGTATTGC TGGCACTGCT GGCCTGTTTG
TATAAAGGAG GGAAGCCCGG CAACCTGCAC TGGATGCGGC CTTCCTGGTG GGGCATATTG
GGCATTATTG GCTGGGCCTA CCTGGTTTGC GCCTTTGTTT ATTTGCTAAG CAAAGGAAAG
GCATTTTGGC TGGGTACTGC ACTGGTCTTG TTTTTTGGCA TTAACCTGCT TTCACATGCC
GGTTTAATGC CTTTTGAAAT ATGGATTATT GGCGATGCTT CCAACGAGAC ACTCATTATG
TTTGGTGTGC TGGCTTCGCT GCTGTATGTG AACTGGAGAA ATGCACTGAG TGGTCGTTTG
CTCGCTGTAT TTTCAGCTGC GGGGGTTTTA CTGATTATTT TAGGCCTGTT GGTAAGACCT
TTTACAGAGG GGATCTCTAA AATCAATGCT ACACCTGCCT GGGTGGCCAT ATGTGCCGGC
ATCAGTTTAC TGGCCTTTGC GCTGATGATC TTTGTGGTTG AACTGAAAGG TAAAAAGGGA
TGGTTCAGCA GCATAGACGC TGCCGGTACA AGTACGCTGA CCTGCTATCT GATCCCTTAT
TTTTTATATG CCTTTTTTGA GCTCGCTGGT TTCTGGTATC CGGACCTGAT CAATACCGGG
CTCATCGGAG TTTTGCGTTC CTTTATCATC TCATTCCTGA TCATCCTGCT GGTAAGGCAG
ATGGAAAAAA GGGGCATCAG ATTAAAAATT TAA
 
Protein sequence
MELKPGIRFQ AVDVLRALTM FLMIFVNDVG SVKYLPHWVD HVEADVDGMG FADTIFPAFL 
FIVGLSLPFA LQSRMNKGKS FLSISLYIVL RSAALIVMGF FHVNSGAYSE AALLPRPVWT
ILTTFSFFLI WMDYPKQWSL RKKNLLVTLG IVLLALLACL YKGGKPGNLH WMRPSWWGIL
GIIGWAYLVC AFVYLLSKGK AFWLGTALVL FFGINLLSHA GLMPFEIWII GDASNETLIM
FGVLASLLYV NWRNALSGRL LAVFSAAGVL LIILGLLVRP FTEGISKINA TPAWVAICAG
ISLLAFALMI FVVELKGKKG WFSSIDAAGT STLTCYLIPY FLYAFFELAG FWYPDLINTG
LIGVLRSFII SFLIILLVRQ MEKRGIRLKI