| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2693 |
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| Symbol | |
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| ID | 8253801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3157681 |
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| End bp | 3159120 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936341 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_003092956 |
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| Protein GI | 255532584 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.101343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00474294 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATAAAC GAAAAGTACT TTTAGCAGTA ATGGCCATCT TAGTATTGGG GCAGTCTGTT
TACAGTCAGA AAACATTAAC CAAGGATGAA CGGATGGCCT GGTGGCGTGA GGCCAAGTTC
GGGATGTTTA TCCACTGGGG GATATATGCC CAGTTTGCAG GCGTGTATAA AGGGCACGAG
CAGCTGCGGG GTGGGGCAGA ATGGATCATG AACAGGTCTA AGATCCCTGT TGCCGAATAT
CAGGAAATGG CCAAAAGCTT TAATCCGGTA AAATACGATC CTGATGCCTG GGTAAGGATG
GCAAAAGATG CAGGAATGAA ATACCTGATC ATTACGGCCA AACACCATGA TGGCTTTGCC
TTATTTAATT CCAAGGCCAG CAAATGGGAC GTTACAGATG CTACAGCTTA TGGCAAAGAT
TTGCTGAAGC CTTTGGCAGC TGCCTGTAAA AAGTATGGCA TTAAACTGGG TTTTTATTAT
TCGCAGGCAC AGGACTGGAA CAATCCGGGT GGATCGGCCG CAAGAAAGGA AATGAGGGAA
GGCTGGTTAA ATCCGGATTC TGCTAAAATA GATGCCTATA CTGCTGCGAA TAAAGGACAT
TGGGACCCGG CTCAAATGAC CCGTACTTTT GACCAGTACA TTGATGAGGT GTCTGTACCG
CAGGTGAAGG AGCTGATGAC CAATTATGGC GATATTGCTG TGCTTTGGTG GGATACTCCA
ACGAATATGA CCGATGAAGC AGCGCTGAAA CTGCAGGCTG CCTTAAAAAC CCAGCCACAC
ATCATTACCA ATGACCGTTT AAAACGTCCT AATTTTCCGG GTGATACCAA AACTCCGGAA
CAAAAAATAC CTACCCAGGC AGAACTGGAT GGGATGGACT GGGAAACCTG TATGACGATG
AATGGTACCT GGGGTTTCAG AACTTCAGAC CACAAATGGA AATCTACAGA AACGCTGATA
CGCAACCTTT GTGATATTGC CTCAAAAGGA GGGAACTATT TACTGAATGT TGGCCCTAAA
CCGGACGGAA CATTTCCGCA GGAAAGCATT GACCGCCTGG CAGCGATAGG TAAATGGATG
AAAGTGAACA GCGAGTCTAT TTATGGCACT AAATCGAGCC CGCTTGCAGC CTTGGACTGG
GGCCGTTGCA CCAGAAAGGA AACGGCTAAA GGTACCACAC TTTATTTCTC GGTATTCAAC
TGGCCTTCAG ATGGTCAGCT GCTTATTCCT GGTGTAAAAA ATAAAGTACT ATCGGCTACT
TTACTGGCTA CCAAAGCTAA ATTGAACACA GATAACAAAG CGGGTGAGCT GATCATTAAA
GTACCTGGAC AAGCACCGGA TGCGATTGCA AGTGTGATTA AAGTTGAATT TGAAGGTGTT
GTAGCGCATC AGACAGATAC AAAGCCCAAA AAGGAAATGA AGACAGGGGC TTTAGATTGA
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| Protein sequence | MYKRKVLLAV MAILVLGQSV YSQKTLTKDE RMAWWREAKF GMFIHWGIYA QFAGVYKGHE
QLRGGAEWIM NRSKIPVAEY QEMAKSFNPV KYDPDAWVRM AKDAGMKYLI ITAKHHDGFA
LFNSKASKWD VTDATAYGKD LLKPLAAACK KYGIKLGFYY SQAQDWNNPG GSAARKEMRE
GWLNPDSAKI DAYTAANKGH WDPAQMTRTF DQYIDEVSVP QVKELMTNYG DIAVLWWDTP
TNMTDEAALK LQAALKTQPH IITNDRLKRP NFPGDTKTPE QKIPTQAELD GMDWETCMTM
NGTWGFRTSD HKWKSTETLI RNLCDIASKG GNYLLNVGPK PDGTFPQESI DRLAAIGKWM
KVNSESIYGT KSSPLAALDW GRCTRKETAK GTTLYFSVFN WPSDGQLLIP GVKNKVLSAT
LLATKAKLNT DNKAGELIIK VPGQAPDAIA SVIKVEFEGV VAHQTDTKPK KEMKTGALD
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