| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2689 |
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| Symbol | |
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| ID | 8253797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3154296 |
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| End bp | 3154976 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644936337 |
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| Product | Endopeptidase Clp |
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| Protein accession | YP_003092952 |
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| Protein GI | 255532580 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00348964 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAACACCA ACGAATTTCG CCGCTATGCG GTAAAGCACC ACCGCATCAA CAGCTTGTAT
GTAGACAAAT ACATCAGCAG GACTTCGGCT ATGGCCGGGC CTGTGGCCAT GACACCTTAT
ATCACCGAAG AAAGACAACT TAACGTTGCC CAGATGGATG TATTCTCCCG TTTAATGATG
GACCGCATCA TTTTTCTTGG TGAGGCGGTT GACGAAAGAA ATGCCAATGT CATCCAGGCA
CAGCTGCTCT TTCTGCAATC GGCGGATGCG GAAAAAGACA TTCAGCTTTA TGTCAATTCT
CCCGGCGGAT CCGTTTATGC CGGACTGGGG ATTTACGATA CGATGCAGTT CATTGCTCCT
GATGTAGCTA CCATTTGTAC AGGTATTGCG CTCTCTATGG GATCGGTATT GCTATGTGCA
GGCGCAGCAG GAAAACGTTC GGCCCTGCAG CATGCCCGCG TAATGATCCA TCAGACTTCT
GGTGGTACGC AGGGAACAGC TACCGATATG GACATCTCTG TCAGGCAGGT ATTGCAGGTG
CAAAAAGAAC TTTATCAGAT CATCGCCAAA CATAGCGGAC AGCCTTATGA GCGGATCAAT
GAAGCCGCGA GCCGGGACTA CTGGATGACC TCGGCAGAAG CAAAGGAGTT CGGGATGGTT
GATGAGATCT TGTCGAAATA A
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| Protein sequence | MNTNEFRRYA VKHHRINSLY VDKYISRTSA MAGPVAMTPY ITEERQLNVA QMDVFSRLMM
DRIIFLGEAV DERNANVIQA QLLFLQSADA EKDIQLYVNS PGGSVYAGLG IYDTMQFIAP
DVATICTGIA LSMGSVLLCA GAAGKRSALQ HARVMIHQTS GGTQGTATDM DISVRQVLQV
QKELYQIIAK HSGQPYERIN EAASRDYWMT SAEAKEFGMV DEILSK
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