Gene Phep_2676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2676 
Symbol 
ID8253784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3134642 
End bp3136015 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content40% 
IMG OID644936324 
Productpeptidase M16 domain protein 
Protein accessionYP_003092939 
Protein GI255532567 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.948951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.552132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCA CTACACCGTT TTTTATACTG GCTCTGCTCC TGCATTCCAT CACAGTCTTC 
CCCCAACAGA AACTTGATGA GAACATGTAC TTCAAGAAAT TACCAAACGG ACTTGAGGTA
TTAGTGGTGG TAGACAATAC CATCCCTATG GCGACCATCG AAATTGCCTG CAGAAATGGT
TCATTTACTG AAACTAACGA ATTCAATGGC TTAAGCCATC TTTATGAACA CCTCTTCTTT
AAGGCCAATA AAGATTATCC GGATTATCAA AGTTTCGATA AAAAGAGCAA TGAACTGGAT
ATTAACTCAA ATGCAACCAC GCGTGAAGAA GTGGTCAATT ACTTTTTTAC CCTTCCCTCT
TCCAATCTGA AACCTGGATT AAAATTTATG AATTCAGCCA TCCGTTATCC TAAATTTAAT
AAAGAAGATA TGCAGATGGA GAATGAAGTG GTAAATGCTG AATTTACACG CCAGGAGTCA
AATCCAATGT TTGCACTAAT AGATGCCAAC AAAAAACACA TGTGGGGTGC CGATTATTCA
CGGAAAAACA TAATCGGGAA CCACGATGTG ATCCTGTCGG CCACACCATC CAAAATGGAT
TCCATTAAAA ATAAATATTA CTGGCCCAAC AACGCTGTAC TGGTTATAGT CGGCGATGTA
AAAGTTAACG AAACTTTTAA CGCAGTAGAT GAAATCTTCA GCAGCTGGAA AGCCTCTCCA
TTCGATCCTT TTAAAAAATG GCCTATCCCT GAATTTAAGC CTATCCTTAA AAACGATTAT
TACATCCTCG AAACAGATAA GACCCAGGTG CCCTATATGC TGTTCAGCTG GCATGGGCCA
GATACCAGAA ATGATATCCC CGGAACCTAT ATTGCCGATG TATTCTCCTT CATTGTAAAC
CAGAATGGTT CAAAACTGAA ACAAGCATTG ATCAATTCAG GCCTGGCACA GGTAGCAGAG
GTAAACTATT ATACCCAAAA ATATACCGGC CCCATCAGCT TGATGATTAG CCCCAACCCA
GCCAGGGTCA AAGACTGTTA TGAAGAAGCT TTAAAACAGA TTGCACTTTG GGATGAAGAC
GATTACTTGT CCGACCTTCA GATAGAGCGT GCAAAACGCC TGCTTTCCAT TGATGCAATA
GAACGCCGTG AAGTAGCTGC AGATTATGCG CATACACTTT CTTTCTGGTG GGCATCTGCT
TCTATAGATT ATTATACGCA TTACGAAGAA AATTTAAACA AGGTTACCCG GAAAGACCTG
CTCGATTACG TTAAAAGGTA TATCAAGGAC AAACCTTACT GTGCAGGTTT ATTGATCCAT
AAAAACAATG CTGTTACGGT GAAGCCCCAG GAATTCTTTA AATCAACCAA TTAA
 
Protein sequence
MMRTTPFFIL ALLLHSITVF PQQKLDENMY FKKLPNGLEV LVVVDNTIPM ATIEIACRNG 
SFTETNEFNG LSHLYEHLFF KANKDYPDYQ SFDKKSNELD INSNATTREE VVNYFFTLPS
SNLKPGLKFM NSAIRYPKFN KEDMQMENEV VNAEFTRQES NPMFALIDAN KKHMWGADYS
RKNIIGNHDV ILSATPSKMD SIKNKYYWPN NAVLVIVGDV KVNETFNAVD EIFSSWKASP
FDPFKKWPIP EFKPILKNDY YILETDKTQV PYMLFSWHGP DTRNDIPGTY IADVFSFIVN
QNGSKLKQAL INSGLAQVAE VNYYTQKYTG PISLMISPNP ARVKDCYEEA LKQIALWDED
DYLSDLQIER AKRLLSIDAI ERREVAADYA HTLSFWWASA SIDYYTHYEE NLNKVTRKDL
LDYVKRYIKD KPYCAGLLIH KNNAVTVKPQ EFFKSTN