| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2669 |
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| Symbol | |
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| ID | 8253777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3124611 |
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| End bp | 3125180 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644936317 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003092932 |
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| Protein GI | 255532560 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0715709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.706393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGTTTA AAGACTCAGA TAGAAATTTA TGGACTTCAT TCATTGATGG TGATGCGAAT
GCTTTGAATT TGCTGTATAA ACAGTTTGCA GATGCTCTGT ATGCTTTCGG TCTTAGGTTC
ACAGAGGATA CCGAGCTGGT TAAAGATGGT ATTCAGGATT TGTTTGTAGA CCTTTTTAAA
TACCGGAAGA CACTTGCCCC CGAAGTAAAT GTAAAATCAT ATCTCTTTAC CTCATTAAAG
CGTAAAATTT GTTTGGTATT GAAAAAGAAG GCAGCAGAAG CAAATCATAG TTTTGAAGTG
CCTTTTTTAC TTTCTTCCAG TATTGAAGAG CAGATCATAA GTGATGAGCA GCAGTCTGAA
CTTTTGTTAA AACTAAACAA ACAGCTGGAA TTGCTGCCCA GCCGCCAAAA GGAAGCTTTG
TACCTTAGGT TTAATGCAGA GCTGGACTAT GAGGAAATTG CTGTGGTTAT GAATGTTTCC
TTAGAGACCT GCCGTACACT TGTATATAGG GGGGTAAAAC AATTACGGGA ACGCATGGTT
GTGAACCATC TTTATAAAAT ACTGGCATAA
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| Protein sequence | MMFKDSDRNL WTSFIDGDAN ALNLLYKQFA DALYAFGLRF TEDTELVKDG IQDLFVDLFK
YRKTLAPEVN VKSYLFTSLK RKICLVLKKK AAEANHSFEV PFLLSSSIEE QIISDEQQSE
LLLKLNKQLE LLPSRQKEAL YLRFNAELDY EEIAVVMNVS LETCRTLVYR GVKQLRERMV
VNHLYKILA
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