Gene Phep_2668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2668 
Symbol 
ID8253776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3123436 
End bp3124521 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content43% 
IMG OID644936316 
ProductFecR protein 
Protein accessionYP_003092931 
Protein GI255532559 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.153362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.801994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCGA AGAATAATTA TAAAGCCGAG GATTTTTTGT CAGACCGTGT TCCGGAAGAT 
CAGCAAAAAT TCATTTCCGA CAGTGAACGT GAGCTTGCCC ATGAAATAAA AGCTACTGTG
AAGGCTGCGG GCCGGGAAAA AATACCTGAA TTAGAGGCTG CCCAGCTTTG GGAGCGGATT
GAGGAGCAGA CGGCAGCCAG ATCTAAAATA TACAATTGGA AAAAGTTTCT GCAGGCAGCA
GCGGCGTTGC TATTTGTGCT GGGCATAGGC GTATGGCAGT ATGAAAAGAA TACACCTACC
CATAGATTAC TGGATTTTGC AGCACAGAAT GTGAGCAAAA AGAATGCAGG CGGTGGTAAG
CGGTCTTTAC AACAGCATAC CCCTGGTCTG GAGTCAGCTG TAAATGAGGA AGAAAATATC
ATTACCGCAA ATGATTTCAA TACACTTGTA GTTGGCAATG CCCAACGCTC GGTAATTAAA
CTCCCGGACG GTACGAAAGT ATGGCTGAAC TCCGGATCCA GATTAATTTA TCCGGTTGCA
TTTTCTGGCG ATAAGAGAGA AGTTTATCTA GAAGGAGAAG CTTATTTTGA TGTTACGCAC
GATAAGGAAC ACCCGTTTTT TGTACATGCA GACAAAATGG ACATTAAGGT GCTGGGAACT
GAATTTTATG TAAGCTCCAA TACGGACAGC ACCGATAATT ACGCAGTGCT GGTTCATGGA
AGTATTGCTT TTTCGACTGG AAACTGGCTA AATAAGGTAG AACGTAAACT GGTTCCGGGC
CAACGGATCA ATTACGACCT TAAAGCCAAT AAACTTTCAA TATCGGAAGT TAAGACGGGG
GAGTTCCAAT CCTGGAAAGA TGGTTTTGTG AATGTGAACA GTGAACCTTT AGATGTGATC
GTACAGCGGG TAGCCAGGTA TTACAATATA GCGATCAGCA CACAGGGGCT GGATCTGTCT
GATGAAAAAT TTACCGGACC ACTTTATTTT CAGCGCAGTG CTGATGACGT ATTGAATATT
TTATGTGAGG GAACACCATA TATATACAAC GGTGTAGAAA GGAGGTTGGA ACTGAAGAAA
CGCTAA
 
Protein sequence
MDSKNNYKAE DFLSDRVPED QQKFISDSER ELAHEIKATV KAAGREKIPE LEAAQLWERI 
EEQTAARSKI YNWKKFLQAA AALLFVLGIG VWQYEKNTPT HRLLDFAAQN VSKKNAGGGK
RSLQQHTPGL ESAVNEEENI ITANDFNTLV VGNAQRSVIK LPDGTKVWLN SGSRLIYPVA
FSGDKREVYL EGEAYFDVTH DKEHPFFVHA DKMDIKVLGT EFYVSSNTDS TDNYAVLVHG
SIAFSTGNWL NKVERKLVPG QRINYDLKAN KLSISEVKTG EFQSWKDGFV NVNSEPLDVI
VQRVARYYNI AISTQGLDLS DEKFTGPLYF QRSADDVLNI LCEGTPYIYN GVERRLELKK
R