| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2666 |
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| Symbol | |
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| ID | 8253774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3118473 |
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| End bp | 3120059 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936314 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003092929 |
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| Protein GI | 255532557 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.453951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.89358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TATATTATTT ATTGTTCCCT GTTTTGCTGA TAACATTGGG GGGATGCGAA
AAATTTTTAA CCCATGACAA TCCTACAGAT GTTTATGATG ACATTTGGTG GAATACGGAA
CCCAATGTTG CTGCGGCACT AAATTCTATC TACGTAGGTA TTCCAGACGG TTCTTCAGGA
AGACAGCTGA TGTTCCTTGA TGCATTAAGT GATAATGCTG TTGCAAGGCA AAGTTTAAGG
GGCGATTATG AATCCTATGT AAAAGGGCTA CAGGGGCCAA ACTGGGGAGT AGGGACCGGG
ATCTGGGACG ATGATTACAG GGATATCAGG AGGGCTAATC GTTTTCTGGA AAACATAGAC
AGGGCATATA TGCCAGTTGA AACACTTAAA AAGCAATATA TTTATGAAGC AAGGGCATTA
CGGGCCTATT ATCATATGGA GCTTTTTATG TTTTTTGGCC GGATTACAAT TATGAAACAA
TCTGTAACAC CGGATAACAG CTATTTACCA CGTAATTCTG AACAGGAGAT TTACGATTTC
ATCATTTCTG AACTTACTGA ATGTGCAAAT AATCTGCCCG ACAAATATAT TGTGAATGTG
GATTTAAAAA GAATGTCGGC AGCTACTTGC TGGGGGCTGG TTTCTAAACT GGCACTTTAT
TACAAAAAAT ATGATGTGGC AAGAGATGCA GCCAAAAAGA TAATAGACAT GAATGCCTAT
AGTCTGCGTA AAAGTACCAC ATTGAAAAAC AGCTATGCAG ATTTGTTTCT GTATGTTGGT
GAAGTTAATG ATGAGCGCAT TTTTTTTAGG GAAATAACAA GTGGAGGTAA CCAATGGAAT
ACTTTTGCCC CTCAGGGTAC AGGCGGAAAA ACTGTCGTTT CACCTTCGGC ATCAATGGTA
AACGCTTATG AGACCAGACA GGGGAAAACT TTAACTGAGC TGGGACCTGA TTCTATGGCT
ATTTATGCAA AAGACCCTAA TTACCGGAAC AATAGAGACC CGAGAATGAT CGCTTCTATC
ATTTTACCTG GAAGCACTTA TACCGGGGTT GTATTAAAGC CATTTGAAGC CGGCCTGGAT
AAACTCGGAG ATCAGAATTC AACTTCAACA GGTTTTTGGA TAAATAAATA CCTGGATCCA
AAAGATAAAA CGGGTACAAG AACGCTCGAC TTTATGATCA TGCGCTATGC AGAAGTACTG
TTAAATTATG TAGAGGCGCT GGTTGAACTG GACGACTACA ATAACCCTGA TGTGGTTAAA
TACCTGAACG AGATCAGGAG CAGGGCTACT ATGCCTAATG TAAATACTAC CGTTTACAAT
ACCAAGGATA AACTACGCGA ACTGGTAAGG CGTGAACGTA GAGTTGAACT GGCATTTGAA
GGTGTACGTT ATTATGACAT CAGGAGATGG GGTATATTTG AACAGGTGAT GAACGGGCAG
GTTACAGGGG CTATTGACCC TTCAACCAAT CAGCCTGTGA ATGTAGAGGT GAGATCGGCC
AAAGCTAACC GGGATATGAT ATGGCCCGTT CCTCAAAAGG AACTGCTGGC GAATCCTAAA
ATGGATCAGA ACCCAAATTA TAATTAA
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| Protein sequence | MKKIYYLLFP VLLITLGGCE KFLTHDNPTD VYDDIWWNTE PNVAAALNSI YVGIPDGSSG
RQLMFLDALS DNAVARQSLR GDYESYVKGL QGPNWGVGTG IWDDDYRDIR RANRFLENID
RAYMPVETLK KQYIYEARAL RAYYHMELFM FFGRITIMKQ SVTPDNSYLP RNSEQEIYDF
IISELTECAN NLPDKYIVNV DLKRMSAATC WGLVSKLALY YKKYDVARDA AKKIIDMNAY
SLRKSTTLKN SYADLFLYVG EVNDERIFFR EITSGGNQWN TFAPQGTGGK TVVSPSASMV
NAYETRQGKT LTELGPDSMA IYAKDPNYRN NRDPRMIASI ILPGSTYTGV VLKPFEAGLD
KLGDQNSTST GFWINKYLDP KDKTGTRTLD FMIMRYAEVL LNYVEALVEL DDYNNPDVVK
YLNEIRSRAT MPNVNTTVYN TKDKLRELVR RERRVELAFE GVRYYDIRRW GIFEQVMNGQ
VTGAIDPSTN QPVNVEVRSA KANRDMIWPV PQKELLANPK MDQNPNYN
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