| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2656 |
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| Symbol | |
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| ID | 8253764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3111700 |
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| End bp | 3113070 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936304 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_003092919 |
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| Protein GI | 255532547 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.60887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGTATG CAGTAGTAGA TATTGAAACC ACTGGTGGTT TTGCTTCCGG GAATGGCATT
ACGGAAATTT CTATCCTGGT ACATGATGGG CGGGAGGTTG TAGAAGCTTA TGAAACACTG
ATTAATCCCG GTCAGGAAAT CCCGGCTTAT ATAGAGACAC TTACTGGTAT CAGTAATGAA
ATGGTGGTAA CTGCTCCTTT ATTTGGAGGT GTAGCTGCCG AAATTTATGC AATGTTGCAC
GATAAAATAT TTGTTGCACA TAATGTGAAT TTCGATTTTT CATTTATAAA ACACCATTTA
AGCTTATCCG GTTATGACCT TCGCTGTAAA AAACTATGCA CGGTTAGGCT GAGCAGGAAG
TTGTTTCCTG GCTATAGTTC TTATAGTTTG GGTAAACTGT GTAATGCGTT AAATATAGCC
ATTCATGACC GGCATAGAGC CGGTGGGGAC GCCAGGGCGA CAGCCGAACT TTTAACACTA
TTGTTAAAGA CTGATCTGGA GGGGATTATA GTCCAGACTT TAAGCCGCGC TTCAAAAGAG
CAGGTTTTGC CACCTCATCT TTCCAGGACC CAGATAGATA AGCTTCCTCA GGTACCCGGT
GTTTACTATT TTAGAGACCA AAAGGGAATT GTTGTTTACG TTGGGAAGGC TAAAAATATT
CTGAAAAGGG TTTGTTCCCA TTTTACCGGT AATAATTCGG GAAAACAGCG TCAGGAATTT
CTTAAAAATA TCCATAGCAT TGATTTTGAG ATTTGCGGGA CGGAGCTTAT GGCTTTTATC
CTTGAAGCGG CCGAGATCAA GCGGTTATGG CCCGAAAATA ATCGTGCTTT GAAGCGTTAT
GAACAGAAAT ATGGATTGTA TGTTTTTGAA GACCAAAAGG GTTATATGAG ACTTGGGATT
GATACCTACA AAAAACGTGT GCCTGTACTA TATAGCTTTA ATTCCTTGGT CGAGGGGCAT
AATTTATTGA GGAGGTTGAT CAAGGAACAC AAGCTCTGTG AAAAACTGTG CTTCATTCAA
AAAAACAGAG ATGCATGTAC CGGCCATAAC GAAGGAAAAT GTAGTGGAGC CTGTCTTGGC
ATAGAGTCTG CCGCCTCCTA TAACGTAAGG GTAAAATATG CCATTGAATA TTTAAGTTCA
ATCCTTCCTA CCTTTGCTGT GATAGATAAG GGGAGGACTG AAGAAGAGCA AAGTTGTCTT
TTGGTAGAGC AGGGTAAATT TTACGGGATG GGCTATATTT CTTACCATAC TGATATTGCG
GGCCCGGAAA TGCTGAAGTC TGTGTTACAG CCTTATCCCT CTGATGATTA CATTTTAAAT
CTGATCAGTA GCCATACGAC CCAGTTTCCA CAAAAGAAAA TAGCAATTTA A
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| Protein sequence | MLYAVVDIET TGGFASGNGI TEISILVHDG REVVEAYETL INPGQEIPAY IETLTGISNE
MVVTAPLFGG VAAEIYAMLH DKIFVAHNVN FDFSFIKHHL SLSGYDLRCK KLCTVRLSRK
LFPGYSSYSL GKLCNALNIA IHDRHRAGGD ARATAELLTL LLKTDLEGII VQTLSRASKE
QVLPPHLSRT QIDKLPQVPG VYYFRDQKGI VVYVGKAKNI LKRVCSHFTG NNSGKQRQEF
LKNIHSIDFE ICGTELMAFI LEAAEIKRLW PENNRALKRY EQKYGLYVFE DQKGYMRLGI
DTYKKRVPVL YSFNSLVEGH NLLRRLIKEH KLCEKLCFIQ KNRDACTGHN EGKCSGACLG
IESAASYNVR VKYAIEYLSS ILPTFAVIDK GRTEEEQSCL LVEQGKFYGM GYISYHTDIA
GPEMLKSVLQ PYPSDDYILN LISSHTTQFP QKKIAI
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