| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2653 |
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| Symbol | |
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| ID | 8253760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3106033 |
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| End bp | 3107751 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936300 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003092916 |
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| Protein GI | 255532544 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGG GCAATACATA TATCACCATA GCTTTTCTAG TAATTTTTAC TTTAAGTGGC
TGTAATAAAT TCCTGGAGCT GGACCCAGAG TCGTCCTGGA AAGAGGAAAC CTTTTACGCT
TCTAAAGAGG AGGCCAATTT AGCCCTGTCG GGAATTTATA GCCAGCTGTC TAAAGAAGAT
TTATATGGAT ATAAATTCAA TGTCACCTTA GAAGCGGGGA CAGATGAAAC CTATACAAAC
GACCCTTCCC CGAACTGGAA TGCGGCAAAA TACGCTTATA CATCTTCAAG TGATGAAATC
AAAAATGCCT GGTTAAAGTT CTATACCTGC ATTCAGCTGG TCAACCAGTT TGAAAAAAAT
TTAAAAAAGG AATTGTTTGC TACCGAGCAA TACAATAATC TTCTGGCGAA AGCCCGCTTT
ATGAGGGCTT TCAGTTATTA TAACCTGGCC AGCTGGTTTG GGCCGGTACC ACTAAGGTTA
ACGCCAAGTA CATCCCAGGA AGATAACAAT GTTCCTCCTT CTCCTGCTCT GGATGTTTAT
AAACAGGCAG AGCAGGATTA TTTATTCGCC GCCGAACATT TGGAACATGC CAATAGCCCC
AGCTATATAC CAGGTGAACC AAACAAGATG GCTGCACATG GCTTGCTAGC CCGTCTTTAT
TTAAAAATGG GGGGTTACCA GCCTTATTTA TCTCCCAGCG ACGCGAACTG TTATTTTGAA
AATCCTCAGC AATATTTTGA AAAGGCCAAG GCACAATGTG AAATCATAAT CAATGATGGC
TGGCACCGGA TTGTTCCCTA TGCTACCGAC AGCAAAAGCT ACCGAACACA CTTCTTAACT
TATTTACAGG ACAAATATGA TTTAAAGGAA AGCTTGTTTG AAATTTCTTT CGGCAATTTA
TACAGCATGG GAATAGCCGT TAGCGGCAGG CTGGGCAATA TCAATGGTGT TGAGTTCGTG
GGAACGTCAA CTATTCCAAG AGGCTTTGCC AATATCAATG TTGCGCTACC GGTATACGAT
GCCTATTCAA TGGGCGATGC CAGAAGAGAG TGGAGCATAG CGGGATACCG GAACAAATAT
TCCACTTCAA CACAGCTTTA CACTATGAAT TACATGTTCA ATAATCCCTT ACATTTCGAA
TATGGTATTG GAAAATTCAG AAGATGGGAA CCTGCAAACC TTGAGGAGTT AAAAACTAAA
GTTAGTGTGA CCAATGCTAA CTATACGATT CTAAACAATA CTACAGGCTC AGATACAGAC
CCTAACTATA CCAGTATAAA TTTCCCGATA TTGAGGTATT CTGATGTATT GCTCATGCAT
GCAGAGGCCA TTATTGGCGG AAGGTTTGGA ACTAATGCCG CAAATTCGGC GGCGGTAAAC
AGTCTTAATG TGGTGAGAGA AAGAGCCGGA TTAGAACCTT ATACCGGCAG TTTAAACCAT
ACTGACTTTT TTAATGAGCT TGTAGATGAA AGATTGAGGG AATTATGCTT TGAAGGACTT
CGTAAGCAAG ACCTGATCCG CTGGAATTTA TTGGAAGATA AACTGAAAGC AACCAATCAA
AAAATAAAGA ACAACCCGCT TTTTCTGGCC AACGATCAAT ATCACCAAAC TTATTTAGAA
CCGGGAAATA ATTTTAACAG GACAAAACAC TTACTTTTAC CTTATCCACT GCAAGAAACA
TTAATCAATA CCAAGCTAAA ACAAAGGTTA GGTTGGTAA
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| Protein sequence | MKKGNTYITI AFLVIFTLSG CNKFLELDPE SSWKEETFYA SKEEANLALS GIYSQLSKED
LYGYKFNVTL EAGTDETYTN DPSPNWNAAK YAYTSSSDEI KNAWLKFYTC IQLVNQFEKN
LKKELFATEQ YNNLLAKARF MRAFSYYNLA SWFGPVPLRL TPSTSQEDNN VPPSPALDVY
KQAEQDYLFA AEHLEHANSP SYIPGEPNKM AAHGLLARLY LKMGGYQPYL SPSDANCYFE
NPQQYFEKAK AQCEIIINDG WHRIVPYATD SKSYRTHFLT YLQDKYDLKE SLFEISFGNL
YSMGIAVSGR LGNINGVEFV GTSTIPRGFA NINVALPVYD AYSMGDARRE WSIAGYRNKY
STSTQLYTMN YMFNNPLHFE YGIGKFRRWE PANLEELKTK VSVTNANYTI LNNTTGSDTD
PNYTSINFPI LRYSDVLLMH AEAIIGGRFG TNAANSAAVN SLNVVRERAG LEPYTGSLNH
TDFFNELVDE RLRELCFEGL RKQDLIRWNL LEDKLKATNQ KIKNNPLFLA NDQYHQTYLE
PGNNFNRTKH LLLPYPLQET LINTKLKQRL GW
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