| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2647 |
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| Symbol | |
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| ID | 8253754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3090515 |
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| End bp | 3091093 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644936294 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003092910 |
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| Protein GI | 255532538 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCAT ATAGTAGATT TTCGGACACC GAACTTGCCG ATTTGCTCAA ATCAGGTGAC
CGTACCGCGT TTACGGAAAT TTTTAATAGA TATAACAGTC TCCTATACAT CCATGCCTTT
AAAAAATTTA ACAATAAAGA GGAGGCACGG GATGCGGTAC AGGAAGCCTT CGCTATGATT
TGGGCAAAGA GGGAAACCCT GATGGTTAAA AGTAATTTGG TGGGATATCT GTATACCTGC
GTACAACATA AAATCCTTGA TCAGATTTCC CGTAATAAAA CCGCTCGTAA CTATTTGGCT
TCATTACAAA ACTTTATAGA TGAAGTAAAA GAAGGTACAG ATGATCTGAT CCGGTTAAAA
CAATTATCAG CCATCATTGA TCAGGAAATT AATGCTTTGC CGAATAAAAT GCGAGAGATA
TTTGAACTAA GTAGAAAAAA GAACCTAAGC CACAAAGAAA TTGCAGCTAA ACTGAATATA
TCTGAGGAGA CAGTAAAAAG CCAGGTTAAA AATGCGTTGA AAATACTGCG AGTTAAACTT
GGTCTGTTTG TATATCTCAT GTTTATGATT CGCTTTTAG
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| Protein sequence | MKAYSRFSDT ELADLLKSGD RTAFTEIFNR YNSLLYIHAF KKFNNKEEAR DAVQEAFAMI
WAKRETLMVK SNLVGYLYTC VQHKILDQIS RNKTARNYLA SLQNFIDEVK EGTDDLIRLK
QLSAIIDQEI NALPNKMREI FELSRKKNLS HKEIAAKLNI SEETVKSQVK NALKILRVKL
GLFVYLMFMI RF
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