Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2642 |
Symbol | |
ID | 8253749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3080854 |
End bp | 3082803 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644936289 |
Product | metallophosphoesterase |
Protein accession | YP_003092905 |
Protein GI | 255532533 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0441775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.87277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATG AGACTTTTAT TTGTTTAACT AAATACAGGA GTCTGGTTAA AAAAGCTGTA TTGCCGGTGA TGATAGGCAT ATCCTCTGTC AGCTGTAAGG ATTTTGATAA TCTGGAAGTA ACATCGAAGG AAAACGCCGC ATCAAGGTCT GCTGTGGCAG GCCAGGTCAG TTCAGGGTCG GATTTTACCA TTGTCGTTTT GTCAGATACG CAGTATTATG TGGAAGGTAC ACCAGCTACT CCAAAGATAA ACATGAATAT GTACCTTGAC CAGATACAAT GGATCATTGA CAACAAAACC ACTGAAAATA TCGCATATGT TGCACATGTT GGCGACATGA CAGATAACGG GGACAACAGC AGTGTACAAT GGCCCAACAA TGCCAAAGCT TTATATAAAC TGGATACGGC AGGCATTGCC TATGGTCCCT GCGTAGGTAA CCATGACCAA TATCCGAATG GATCGAATGC CGGAGGGGGG CCACTTACCA GTACAACCAA TCAGTTCAAT CAATATTTTG GCGTGGCGCA TTTTACTGGA AAGCCTTGGT ATGGAGGGAA TTACGGGACC AATAACGATA CCCATTATGA CCTGTTCAGT GCAGGGGGCA TTGATTTTAT CGCCATCAGC ATCGAATATG ACCTGAATAA CCAGCAATGG AATGCGGTTA ATACCTGGGC TTATAACCTG CTGACTACCT ACCCCTCCCG AAAAGCGATT GTTACTACCC ATTTTGTTAC CGGTGGCCAT TCCCAATACG ATTACAACAA TGATTTTCAT CCTTTTTCGG CGCAGGCGCA AGCAATCTAT GACCGTCTGA AGAGCCTTCC GAATCTTTTT CTGTTTCTTG GAGGCCATGT GAACGGCGAG GGATACCGTC AGGATACTTA CAATGGCAAG ACAGTAAAAA CGATGGTCTC TGACTACCAG TTTTATAAAG ATCCCGATGG GGTGAGCAAC GGAGGAAACG GGTATATGCG GCTGATAAAA ATCTCTCCGG AAAACGATAA GGTCACAGTA AAAACTTATT CCCCTTATCT GGAGAACCGC AGCATCAGCC CCTTTTTCCT GACTGATGCC AACAGCCAGT TTGAGCTGCC TCTGTTCCAT GATGAAAGGG CCAGTCGTAC TTGTGACATT AACCAGGACG GAAAAACAGA ACTCACGCTT TATAGCGGAG GGACCTGGAA GGTAGCCGGC ATGAGTAATG CTACTTGGGG CGTGTCCAGC GATATTCCTG TCCCGGCAGA TTATAATGGA GACGGGAAGG CCGAGATTAC CAGCTTCCGA CCTTCTACAG GCCAATGGAT AGCACGGTCT GCTACCGGAT CTGTATTATT TGACCATGCA TGGGGTTCAA TAAGCGGAGA TACCCCTGTA CCGGGGGATT ATGATGCAGA TGGCAGGGCC GATATTGCTG TATACAGACC ATCTACGGGC GCATGGATAG GACGGGCCTA TTCAGGAGGG ACATTGTTCA ATATCATCTG GGGAATTTCA ACGGATATCC CTGTTCCTGG TGACTATGAC GGAGACGGAC GTATAGATAT TGTGGTTTAC AGGCGCAGCG CAGGAGCGTG GATCGCCAGG GACCCTTCCG ATGGAAGTGT ACTTTTTAAC AGGACCTGGG GCGTTTCTAC CGATATTCCA GTTCCGGGCG ATTATAATGG TGACGGAAAA ACAGATATTC TGGTTTTCAG GCCATCTACC CGCGAATGGA TTGCCCGTAA TCCTGCAAAC GGAAGTGTGT TATTTAATAT CGCATGGGGT AATTCCGGAG ATATCCCGGC ACCAGGAGAT TATGATGGTG ATGGCACAAC AGATGTGGCG GTGTACAGGC CCTCTACCAA TCAGCTGCTG ATCAATGGCG GTGGTACCGT TACTTTAGGC GCATCAGGCG ATAAGCTGGT CAACCTGCCG TATCACATCA GGAAATTTTT CTTTCCCTGA
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Protein sequence | MKNETFICLT KYRSLVKKAV LPVMIGISSV SCKDFDNLEV TSKENAASRS AVAGQVSSGS DFTIVVLSDT QYYVEGTPAT PKINMNMYLD QIQWIIDNKT TENIAYVAHV GDMTDNGDNS SVQWPNNAKA LYKLDTAGIA YGPCVGNHDQ YPNGSNAGGG PLTSTTNQFN QYFGVAHFTG KPWYGGNYGT NNDTHYDLFS AGGIDFIAIS IEYDLNNQQW NAVNTWAYNL LTTYPSRKAI VTTHFVTGGH SQYDYNNDFH PFSAQAQAIY DRLKSLPNLF LFLGGHVNGE GYRQDTYNGK TVKTMVSDYQ FYKDPDGVSN GGNGYMRLIK ISPENDKVTV KTYSPYLENR SISPFFLTDA NSQFELPLFH DERASRTCDI NQDGKTELTL YSGGTWKVAG MSNATWGVSS DIPVPADYNG DGKAEITSFR PSTGQWIARS ATGSVLFDHA WGSISGDTPV PGDYDADGRA DIAVYRPSTG AWIGRAYSGG TLFNIIWGIS TDIPVPGDYD GDGRIDIVVY RRSAGAWIAR DPSDGSVLFN RTWGVSTDIP VPGDYNGDGK TDILVFRPST REWIARNPAN GSVLFNIAWG NSGDIPAPGD YDGDGTTDVA VYRPSTNQLL INGGGTVTLG ASGDKLVNLP YHIRKFFFP
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