| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2635 |
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| Symbol | |
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| ID | 8253742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3070133 |
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| End bp | 3071029 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936284 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003092900 |
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| Protein GI | 255532528 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.795136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATC AACAGAATCC CTTAGAGAAT CCAGCAGAAA AATATCCTAA ACCTCCTTTT
CCAAAGCAGG ACCAACCAGC TCCAGGAACA GAGGGGCGGC TCCGTCCACA GGCAGATCAT
GGAGAAGAAT CCTATAAGGG CAGTGGCAAG CTAGTGGGAA AGAAGGCTAT AATAACTGGT
GGTGATTCAG GCATAGGCCG TGCGGTGGCA ATTGCTTTTG CCAGGGAAGG AGCGGATGTT
TTGATCAGTT ATCTTGATGA TGTGGAAGAT GAGGACGCCA ATATTACTGC AGGACTAGTG
GAAGCAGCCG GCAAAAAGGC AATTTTAGTG AAAGGGGACA TACAGGATGA AGCTCATTGC
CAACACATTA TTGATACGGC TGTAAAAGAA TTCGGTGGAC TGGATATCCT GGTCAATAAT
GCAGCTTTTC AGATGGCAAG AAAAACAATG GCTGATATTC CAACTGAAGA ATGGGAGCGT
ACTTTCCGCA CCAATATCAC TGCGATGTTC TTTTTATGTA AAGCGGCAGA GCCTCACCTT
AAACCTGGCA GTAGCATTAT CAATACGACT TCAGTAAATG CTTATTCACC AAGTGAGCAA
TTACTTCCTT ATGCGGCCAC AAAAGGGGCT ATTCAAAATT TTACGGCTAA TTTGAGCCAG
ATTTTGTTGA TGGATGGTAA AGGCATTCGG GTAAATGCAG TGGCGCCGGG GCCTATATGG
ACACCGTTAA TCCCTTCTAC TATGCCAGAG CACGAAGAAT TTGGTAAGGA TACGCCTATG
AAAAGGGCTG GTCAACCTGC TGAGGTGGCG CCTGCATATG TGTTCCTGGC TTCCCAAGAT
GCGAGCTATA TAGCAGGGGC TACCATACCT GTTACCGGAG GACGGATTAC AATTTGA
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| Protein sequence | MENQQNPLEN PAEKYPKPPF PKQDQPAPGT EGRLRPQADH GEESYKGSGK LVGKKAIITG
GDSGIGRAVA IAFAREGADV LISYLDDVED EDANITAGLV EAAGKKAILV KGDIQDEAHC
QHIIDTAVKE FGGLDILVNN AAFQMARKTM ADIPTEEWER TFRTNITAMF FLCKAAEPHL
KPGSSIINTT SVNAYSPSEQ LLPYAATKGA IQNFTANLSQ ILLMDGKGIR VNAVAPGPIW
TPLIPSTMPE HEEFGKDTPM KRAGQPAEVA PAYVFLASQD ASYIAGATIP VTGGRITI
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