Gene Phep_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2620 
Symbol 
ID8253727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3063102 
End bp3063401 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content48% 
IMG OID644936269 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003092885 
Protein GI255532513 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.824016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCA AATACCACAA TCTGCCCCTG AATATGGTAA ACGACCACAT CATCAGAATA 
AGCATCATGA CCCTGCCTTA TTATTGGCAT TACCATCCCA ATTCAGATGA AAGTTTCCTC
TGCCTGGAAG GCCAGCTGAT TATAGAACTC CAGGATCAGC TTATCGAACT CAGCCCCGGA
CAGCTTTACA CCATCCCCGC CAACGTACTG CACCGCACCA GGCCTAAAGG CGAGCGCTCA
GTCAACCTTA GCTTTGAACT GGAATCCATG CAGACCATTA AAAAAGAACC AGAATCATAG
 
Protein sequence
MSGKYHNLPL NMVNDHIIRI SIMTLPYYWH YHPNSDESFL CLEGQLIIEL QDQLIELSPG 
QLYTIPANVL HRTRPKGERS VNLSFELESM QTIKKEPES