| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2605 |
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| Symbol | |
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| ID | 8253712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3050901 |
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| End bp | 3052292 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936255 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_003092871 |
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| Protein GI | 255532499 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00783953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC ATACATTTTA CATCACACTC AGCGTGTCAT TATTCCTGAT GACTATATCC
CCCGGCAATT TTGCCCAAAC CTATCAGCCG GAATGGCAGT CGCTCGATAA AAGGCAGACC
CCCAGCTGGT GGACTGATGC CAAGTTCGGT ATTTTCATTC ATTGGGGCCT GTACTCCGTT
CCGGCTTACG CACCTGTTAA CGAGGTTAAA GGAGTTTACG AAAAATATGC GGAACATTAC
GAAAACAGGC TGATACAAGG CAATAAATTA TTTACCGACC ACCATAAGCA ATTTTATGGG
GAGCAGTTTA AATACAGTGA TTTTGCGGCA ATGTTTAAAG CAGAATACTT TAAGCCAGAA
GAATGGGCCG ATCTGTTTGC TAAATCTGGG GCAAAATATG TGGTGTTGAC TTCCAAGCAC
CATGATGGAT TTTGTTTATG GCCAAGTGCT GAAAGTAATA AATGGAACAG TGTGGATGCC
GGGCCTCACC GTGATCTGGC TGGCGATCTT ACAAATGCAG TTAAAGACAA AGGCTTAAAA
ATGGGTTTTT ACTATTCATT GCTAGAATGG AACAACCCGC TTTATAAGCC CCAAACCATA
GACAATTATG TAGAAAACCA CATGTCACCT CAAATGAAGG ACCTCGTAAC CCGATATAAG
CCAGAGGTGA TCTTTGCAGA TGGAGAATGG GATTACCCAT CAGAAAAACT CAGGAGTCCC
CAATTCCTTT CCTGGTTGTA TAACGAATCG GCGGTAAAAA ACACAGTTGT TGTCAATGAC
CGATGGGGAA AAGAAACCCG CAGTAAACAT GGCGGCTATT ACACTACCGA ATATGACCTG
GTACACGATG CCAAAGGTAT TGGCGAAAAA GCAGCACATC CATGGGAAGA GAGCCGTGGC
ATAGGTACCT CTTATGGTTT TAACCGGTTT GAAACATTGG AGCATTATTT TACAAGTAAA
CAGCTGGTAG ACCTACTGAT TGATAAAGTG AGTAATGGCG GTAACCTGCT GCTCAATATT
GGTCCGGATG CCAATGGCTT AATCCCTATA ATTATGCAGG AGCGCCTGCT GGATATAGGT
GCCTGGCTAA AGGTGAACGG AGAGGCCATA TACGGCAGCA GTTCCTGGAT AGGCGGGGCA
GCAAACCAAA AGGACAAAGG TATTTTTTAC ACCCAAAAAG GTAAAGATAT TTATATAATA
TGCACAAAAT GGCCACAAAC TGATATGACA ATCGGAACGA TTAAAAAGGC AGGCAAAGTT
AGTTTGCTGG GTTCCGCTAC ACCTGTCAAG TCGGAGATAA AGAGAGGAGA ATTACACATA
ATCCCTCCCA TCCTGAATCC GGCAACAATG CCATGCCAGT ATGCCTGGGT ATTTAAAGTA
AAAGTGATAT GA
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| Protein sequence | MKKHTFYITL SVSLFLMTIS PGNFAQTYQP EWQSLDKRQT PSWWTDAKFG IFIHWGLYSV
PAYAPVNEVK GVYEKYAEHY ENRLIQGNKL FTDHHKQFYG EQFKYSDFAA MFKAEYFKPE
EWADLFAKSG AKYVVLTSKH HDGFCLWPSA ESNKWNSVDA GPHRDLAGDL TNAVKDKGLK
MGFYYSLLEW NNPLYKPQTI DNYVENHMSP QMKDLVTRYK PEVIFADGEW DYPSEKLRSP
QFLSWLYNES AVKNTVVVND RWGKETRSKH GGYYTTEYDL VHDAKGIGEK AAHPWEESRG
IGTSYGFNRF ETLEHYFTSK QLVDLLIDKV SNGGNLLLNI GPDANGLIPI IMQERLLDIG
AWLKVNGEAI YGSSSWIGGA ANQKDKGIFY TQKGKDIYII CTKWPQTDMT IGTIKKAGKV
SLLGSATPVK SEIKRGELHI IPPILNPATM PCQYAWVFKV KVI
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