| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2601 |
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| Symbol | |
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| ID | 8253708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3042291 |
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| End bp | 3044147 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936251 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003092867 |
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| Protein GI | 255532495 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.913559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGA TAAAATATTT TTACCTCATT ATGCTGACAG CCATCACCAT TTCCTGTCAG
AAAGTACTGG ACACCAATCC GACTGATTTT ATTGATCCTT CGGCCTTTTA CAAAACACCC
GAACAACTGC AAAGTGCCTT AAATGGCGTA TATAATGCCC TGGGTACGCA AGAAGTATAT
GGAAACAACT ACCTGTATAT GTTTAATACC AACACAGACG AATCTTATGG CCGGACAGTA
GAACTTACTC CCTCTTATCA GTATGATGCG GCGGATGCAA AAAACGAGTT ATTCTGGAAA
GGACTTTACA CCGGTATTGA AAGGGACAAT CTGCTGCTTT CAAAATTGGA TGATGTACCG
ATGGATCAAA CCGCAAAGAA CGTCATCAAA GGACAGGCTT TATTCCTTCG GGGCTTTCAA
TATTTCATGC TGGTCAGCAA TTATGGAGAT GTTCCATTGA TCCTCAGCCC AACAGCCTCT
GTAACACAAG TGAATGTTGC CAGGACTCCG ATGAAAAATG TTTATGCACA AATTACCAAG
GATATGATCG ATGCTGAAGC CCTGTTGCAA ACACAGACTG CCACTGCACT GGGCATGGGC
GGAAAGGTTA CCCGTACGGC GGTACAGGGC ATGCTGGCCA GGGTATATCT GTATATGGCA
GGATTTCCTT TAAACGATAC AGAAAAATAT AAGGATGCAC TGTTCTGGGC CAATAAAGTA
GTTCATCCTT CTGGGAATGC ACCTGAACAT GCCTTAAATC CGGATTACCG CGATGTATTC
TTAAAATATG CAAAAGAACA GTACGATGTA AAAGAAAGTA TGTGGGAGCT GGAATTCTGG
GGCAACAACA CCGGAGGTGT CAACTTTGGA AATACTTATA CCGGCAGGTT CTGCGGCATT
TTGTGTAATG ATGCGAATAA AGGTTTCAGT TCAGGATCTA TAAACGCAAC CCGAAAACTT
TACAACTCCT ACCAACTCAA CCCATTAAGT ACTGCTACAC CAAATAAGGC TTCTTTTGAC
TGGAGAAGAG ATTGGAACTG TGCCAATTAT ACCTGGGGCA GCGGAGCAAC GGCTGTAAAA
ACCACTGTAA CCAATACCTG GCTTATGAAT GCCGGAAAAT GGCGCAGGGA GTACGAAATT
GTTGAGCCCA AAGATAAAAA CTATACTTCT CAGAATTTCG CTTTTCTGCG TTATTCAGAT
GTATTGCTCA TGCTTGCAGA AGCCGAAAAT GAAGTAAACG GACCTGCTAA TGCTTATCAA
TATGTAAATA TGGTCCGCAA AAGGGCTTAT GGCTTATTGT ATGGAAATGT TGTAAAACAC
ATTGCTGTAA CCAACGGAGG TTCTGGCTAT ACAAGTATAC CAACTGTAAC CATTAATGGT
GGTGGTGGCA ATGGGGCTAC TGCTGAGGCA AGTATTTCGG GTGGGTCAGT TACCGGCATC
ACCATTACCG CAGCAGGGAC ATTGACCACT GCCGGCCCGT ACTACAGCTC AGCTCCTGCT
GTAACCATTA CCGGTGGCGG GGGAACGGGT GCTACTGCTA TAGCCACCAT TACCCAATCT
ACCGATGCGG ACCTTTCCGC ATTACAAATC TCCAGCAAAG CAGAACTATT AGCTGCGATA
AAGGAAGAAA GATCAAGGGA GCTTTGTTTT GAAGGGTTAA GAAGGAACGA CCTGATCCGA
TGGGGAAAAT TTGTGGAAGA CATGAAAGCC TTTCTGGTCT ATGCAAATGC CAATGCAGGC
ACAGCAGCAA ACATCACCAC TGCAGCTACC AAAGTTTCTT CCAGGAACAT TTTCATGCCC
ATCCCGATCC ATGATATTCA ATTGAATAAT TTATTAGTAC AAAACCCCGG CTATTAA
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| Protein sequence | MKPIKYFYLI MLTAITISCQ KVLDTNPTDF IDPSAFYKTP EQLQSALNGV YNALGTQEVY
GNNYLYMFNT NTDESYGRTV ELTPSYQYDA ADAKNELFWK GLYTGIERDN LLLSKLDDVP
MDQTAKNVIK GQALFLRGFQ YFMLVSNYGD VPLILSPTAS VTQVNVARTP MKNVYAQITK
DMIDAEALLQ TQTATALGMG GKVTRTAVQG MLARVYLYMA GFPLNDTEKY KDALFWANKV
VHPSGNAPEH ALNPDYRDVF LKYAKEQYDV KESMWELEFW GNNTGGVNFG NTYTGRFCGI
LCNDANKGFS SGSINATRKL YNSYQLNPLS TATPNKASFD WRRDWNCANY TWGSGATAVK
TTVTNTWLMN AGKWRREYEI VEPKDKNYTS QNFAFLRYSD VLLMLAEAEN EVNGPANAYQ
YVNMVRKRAY GLLYGNVVKH IAVTNGGSGY TSIPTVTING GGGNGATAEA SISGGSVTGI
TITAAGTLTT AGPYYSSAPA VTITGGGGTG ATAIATITQS TDADLSALQI SSKAELLAAI
KEERSRELCF EGLRRNDLIR WGKFVEDMKA FLVYANANAG TAANITTAAT KVSSRNIFMP
IPIHDIQLNN LLVQNPGY
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