| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2599 |
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| Symbol | |
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| ID | 8253706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3038153 |
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| End bp | 3038905 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936249 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003092865 |
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| Protein GI | 255532493 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.84456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.228278 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC TAACCGGAAA AACTGCACTT ATAACCGGAT CTTTAAGGGG TATAGGTAAA
GGTATTGCCT TATGCCTGGC AGAAAAGGGG GCCAACATTA TACTTAACGA CCTGGCAGAA
ACCGATGATC TTCAGCAAAC GGTTGACCAG ATCAGGGCAT TTAACCAGGA GGTTTATTTT
AAAGCAGCAG ATGTCAGTTT AAAAACAGAT GTGGAAGCCC TTTTTTCCTT TATTAAAGCC
CATATAGGTC AGCTGGACAT CCTGATAAAC AATGCGGGGA CATCGCAGGC AAAAGACATT
TTTGACATCA GTATTGAAGA TTGGGACCAT ATTTTAAGCA CCAATCTTAG CAGTTGTTTT
CTATGCGCCA AAAATGCGAT GGAAATGATG AAAGTACAAC AGAGCGGACG CATCATTAAC
ATCAGCTCAG TTGTTGGGCA GCAAGGCGCA TTGTATGGTC ATGCTCATTA TGCGGCCAGT
AAGAGCGCCA TTTTAGGCCT TACCAAAACA TTGGCCAGAA CAGGCGCCCC CTTCGGAATC
AGGGTAAATT GTATTGCACC CGGTATCATA GAAACTGATC TGCTAAATCA AACTCACGGA
ATTGAGGGGA TTGCCAAGAT AGCTGCTGGT GTGCCGCTCG GCATCGGACA GCCACGTGAT
ATAGGTTTGA CAGCTGCATT CCTGGCAGGT GAAGGCGGCA ACTACATTAC CGGCGCTACC
ATAGATATCA ACGGAGGGCT TTATTTCAGA TAA
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| Protein sequence | MNELTGKTAL ITGSLRGIGK GIALCLAEKG ANIILNDLAE TDDLQQTVDQ IRAFNQEVYF
KAADVSLKTD VEALFSFIKA HIGQLDILIN NAGTSQAKDI FDISIEDWDH ILSTNLSSCF
LCAKNAMEMM KVQQSGRIIN ISSVVGQQGA LYGHAHYAAS KSAILGLTKT LARTGAPFGI
RVNCIAPGII ETDLLNQTHG IEGIAKIAAG VPLGIGQPRD IGLTAAFLAG EGGNYITGAT
IDINGGLYFR
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