| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2590 |
|---|
| Symbol | |
|---|
| ID | 8253697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 3018516 |
|---|
| End bp | 3019787 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644936240 |
|---|
| Product | nucleoside recognition domain protein |
|---|
| Protein accession | YP_003092856 |
|---|
| Protein GI | 255532484 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.204339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0892212 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTAA GCAGAATCTG GTCGGCCTTT ATCATTGTTG CAATTGTAGT AGCAAGTGTA
AAGTGCTTCT TTTTTGGACA AAGTGATATT TTTAACTGGA TGGTTATCGG CAAAGCCGAT
GATGCCACCA ATCCTTTGAA GTTAGATGGC ATTATACAGA CCTGTTGGGT AGCCGTTGAA
CTTTGCCTCA AACTCATTGG GATTCTGGCC TTGTTTATGG GGCTGATGAG CATTGCCGAA
AGAGCCGGTG GGATCCGTTT ATTGTCGAGG ATTGTAGGAC CTTTCTTCTC CAAACTTTTT
CCTGATATCC CCAAAGGCCA CCCTTCAATG GGGCACATGA TCATGAATTT TTCGGCCAAT
TTACTGGGTC TGGACAATGC GGCAACGCCC TTTGGTTTAA AAGCTATGGA AAGTTTACAG
GAACTTAATC CGAGTAAAGA TGTAGCCTCA AATTCGCAGA TCATGTTTTT GTGCCTCCAT
GCAGCAGGGC TTAACCTTAT ACCGGTTAGT GTAATTGCGA TTCGTGCTTC GCAAAATGCA
TCAAATCCTA CAGATATATT TATTCCCTGT TTAATAGTAA CTTTTGTAGG AACAATAGCT
GCCATGCTTA TTGTTTCTTT TAAACAAAAG ATCAATATCC TGCAACCGGT AATCATCCTG
TGGGTACTTA GTATCTCTTT AGTAATTGCT TTACTGGTAC TTTATATTGT TTCACTGAAT
GCTGAGGGTA TAAAATCTTT TTCCGGCATA TTAAGTAATG GTTTAATACT ACTTGTATTT
TTACTGATTA TACTTGGAGG GCTTTATAAG AAAATAGATG TTTTTGATGC ATTCATAGAT
GGTGCAAAAA ACGGGTTTGA TACGGCTATT AAAATTGTTC CTTACCTGGT TGGAATGCTT
GTTGCCATTT CTCTTCTTCG TACCAGTGGT ACTTTTGATG TGGTGATCAG CACAATAAAA
AGTGCTTTTG CTTTTTTAGG TGCCGACACC AGATTTGTTG AAGGACTGCC AACTGCATTG
ATCCGTCCAT TAAGTGGCGG CGCAGCGAGG GGAATGATGG TAAGTACCAT GGAAACTTAT
GGTCCTGATT CATTTGCCAG CAGGCTGTCC GGAATATTCC AGGGGGCTTC AGATACTACC
TTTTACATAA TAGCTGTTTA TTTTGGCTCT GTAAGTATTA AAAATACACG ATATGCCATC
GGTGCTATGC TTTTAGCAGA TCTGGTGGGT GTTTGTACAG CAATAGGGAT GGCTTATTTA
TTTTTTGGCT AA
|
|---|
| Protein sequence | MALSRIWSAF IIVAIVVASV KCFFFGQSDI FNWMVIGKAD DATNPLKLDG IIQTCWVAVE
LCLKLIGILA LFMGLMSIAE RAGGIRLLSR IVGPFFSKLF PDIPKGHPSM GHMIMNFSAN
LLGLDNAATP FGLKAMESLQ ELNPSKDVAS NSQIMFLCLH AAGLNLIPVS VIAIRASQNA
SNPTDIFIPC LIVTFVGTIA AMLIVSFKQK INILQPVIIL WVLSISLVIA LLVLYIVSLN
AEGIKSFSGI LSNGLILLVF LLIILGGLYK KIDVFDAFID GAKNGFDTAI KIVPYLVGML
VAISLLRTSG TFDVVISTIK SAFAFLGADT RFVEGLPTAL IRPLSGGAAR GMMVSTMETY
GPDSFASRLS GIFQGASDTT FYIIAVYFGS VSIKNTRYAI GAMLLADLVG VCTAIGMAYL
FFG
|
|---|
| |