| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2587 |
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| Symbol | |
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| ID | 8253694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3012567 |
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| End bp | 3014369 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644936237 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_003092853 |
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| Protein GI | 255532481 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0340574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGAA ATACGTTTAC AGGATTGTTC CTGATCATGA TCGTTTTGGC AGGTTCTTTT
TATTTTTTTA AGCCAAGCGA GGCTGAAATA AAAAAAGAAA GGGAAAGAAT CGCTGCTGAT
TCGGCAAAAA AAGCCGGGGT TGTCAACACT CCCACGCCTG TAGCAGCTGT TGCAGCAACA
CCTGTTGTGG ATTCAGCAGC ATTAAAAGGC CCTTTTGGTG CAAACATTAG TGGTACAGTA
CAGACCAGTG TACTTGAAAA TGAAAATTTA AAACTAGTAC TTAGCAATAA GGGCGGTAAA
ATTTTATCCG TTGAGGTGAA AGGAGAAAAA ACCTATAATG GAAAACCTGT CATTTTATTT
GATGGAGATC AGAATAAATT TGGTTTAAAC CTAAACATAA GCGGTAAAAT TGTTAGCACA
AATGACCTTT ACTTTACGGC AACCCCTGGT AATGGTATCG TTACCATGCG TGCCAATTAT
TCGGCTAATC AATACATTGA ATATATTTAT GATCTAAAAC CGAAAAGCAG TCAGGTTGGT
TTTAACATTA ATTTAAATGG TTTAAACCAG GTTATTCAAA ACAATACCAT CGCTTTGAAC
TGGGAAGCTA CCTTGCTTGA ACAGGAAAAA TCCGGGAAAA AAGAGCGGGA GCACTCTGCA
CCCTACTATA AATATGCAGA CAAAAACCCG GACCACCTAA GTATAGCCAA GGATGAAAAA
GAGGAGCTTG CAGCAGGGAA AATTGAATGG ATATCTTTCA AACAACAGTT TTTCTCGGCA
GCCTTAATAC CTAAAAATGG ATTTGAAAAG GGAGATCTTG AGGTTAAAGT AAGTACCGAG
CCTGGAAAAA TTAAATGGTA TGGTGCCAAT ATGGTACTGC CTTTTAACCA GCTTGCAGCG
CAAAGCTATG CCATGGTCTT CTATTTCGGT ACCAATAAAT TCGATACCCT GAAGGCACAG
GGTTATGAAC TTGAAAAACA GGTAGATATG GGCTACTGGC CACTTAAATA CATCAACAGG
TTCATTGTAT TACCTGTATT TAAGTTCTTG GAAAGCTTTA ACTGGAACTA TGGCGTAATC
ATTTTGCTTT TAACCATTGC GCTAAAAGTA GCCATGTCTC CGCTCACTTA TAAATCATAC
CTTTCCATGG CTAAGATGAG GATATTGAAG CCGGAAATGG ATGTGATCAA GGCTAAAGTT
GGTGATGACA ATCCTACGCT TTTACAACAG GAATATTTAA AGCTTTATAA ACAGGTAGGT
GTAAACCCGC TTGGAGGTTG TTTGCCTATG CTGCTGCAAC TGCCCTTTGT AATGGCCTTC
TTCTTCTTCT TCCCTAATTT ATTTGAGTTA AGGGGGGAAA CTTTCTTATG GATGAAAGAT
CTTTCTACTT ATGATGATTT TATCAAATTC GGCTTTACCA TTCCTTTTAT TGGTGATCAC
CTGAGTTTGA TGTGTGTACT GATGACGATC TCTACGTTGA TCTATACTTA TTTCAACAAC
CAGATCTCGG GAGCTACAGG ACAAATGAAA TATATTGGGT ACATCATGCC AATTATCTTT
TTAGGTGTAC TGAACAGTTA CCCGTCAGGA TTAAACTATT ATTATTTCCT GGCCAACATG
CTCACTTTTG CCCAGCAGTT CCTGATCAAA TCTATGGTTG ATGATGAAAA GATCCATAGA
ACATTACAGG AAAATAAAGC AAAACCAGTA GAAAAGAAAA AGAAATCTGG GTTCAGTGCC
AAGTTGGAAG ACTATATGCG CCAGCAACAG CAAACAGCTG CTCAACAAAA AAAGAACAAG
TAA
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| Protein sequence | MDRNTFTGLF LIMIVLAGSF YFFKPSEAEI KKERERIAAD SAKKAGVVNT PTPVAAVAAT
PVVDSAALKG PFGANISGTV QTSVLENENL KLVLSNKGGK ILSVEVKGEK TYNGKPVILF
DGDQNKFGLN LNISGKIVST NDLYFTATPG NGIVTMRANY SANQYIEYIY DLKPKSSQVG
FNINLNGLNQ VIQNNTIALN WEATLLEQEK SGKKEREHSA PYYKYADKNP DHLSIAKDEK
EELAAGKIEW ISFKQQFFSA ALIPKNGFEK GDLEVKVSTE PGKIKWYGAN MVLPFNQLAA
QSYAMVFYFG TNKFDTLKAQ GYELEKQVDM GYWPLKYINR FIVLPVFKFL ESFNWNYGVI
ILLLTIALKV AMSPLTYKSY LSMAKMRILK PEMDVIKAKV GDDNPTLLQQ EYLKLYKQVG
VNPLGGCLPM LLQLPFVMAF FFFFPNLFEL RGETFLWMKD LSTYDDFIKF GFTIPFIGDH
LSLMCVLMTI STLIYTYFNN QISGATGQMK YIGYIMPIIF LGVLNSYPSG LNYYYFLANM
LTFAQQFLIK SMVDDEKIHR TLQENKAKPV EKKKKSGFSA KLEDYMRQQQ QTAAQQKKNK
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