Gene Phep_2586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2586 
SymbolpyrG 
ID8253693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3010930 
End bp3012546 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content39% 
IMG OID644936236 
ProductCTP synthetase 
Protein accessionYP_003092852 
Protein GI255532480 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0504] CTP synthase (UTP-ammonia lyase) 
TIGRFAM ID[TIGR00337] CTP synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0528943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGT ATATTTTTGT TACGGGCGGT GTTACTTCCT CATTGGGCAA GGGCATCATC 
TCCGCTTCAT TAGCCAAATT ATTGCAAGCA CGTGGCTATA GTGTTACCAT CCAAAAGTTT
GACCCTTATA TCAATATTGA TCCGGGAACC TTAAACCCTT ATGAGCATGG AGAATGCTAT
GTTACCGAAG ATGGTGCAGA AACAGATCTT GACCTTGGTC ATTACGAACG TTTTTTAAAC
GTTGCTACTT CGCAGGCCAA TAACGTTACC ACTGGCCGGA TTTATCAGAA CGTAATCAAT
AAAGAGAGAC AAGGAGAATA TCTGGGTAAA ACAGTACAGG TAGTACCACA CATTACCGAC
GAGATTAAAA GGAATATGCG TTTGCTGGGA GAAACCGGCG AATATGATAT TGTAATCACT
GAACTGGGAG GCACAGTTGG TGATATTGAA TCTCTGCCGT TTATTGAAGC GGTACGTCAG
TTTAAATGGG AAGAAGGTGC ACACAATGCG ATTGTAATCC ACTTAACACT AATTCCATAT
CTTGCTGCTG CCGGAGAATT AAAGACCAAA CCTACGCAAC ACTCTGTAAA AGCATTACTG
GAATATGGTA TCCAGCCAGA TATCCTGGTT TGTCGTTCAG AACGTTCCAT ATCTCTGGAT
ATCCGCAAAA AAATTGCCTT ATTCTGCAAT GTAAACGTAA ATGCGGTAAT CGAATCACTG
GATGCCTCTA CAATATATGA TGTTCCTTTA CTGATGATGA AAGAACAGCT GGATAAAACA
GTATTGAGCA AACTTAAACT TGCACAAAAA AATGAGCCGG ACATGGAGAG ATGGAAAGAA
TTCCTTGGCC GCTTAAAAAA CCCGACCTCA GAAGTAAAAA TTGGTTTGGT TGGTAAATAT
GTAGAATTGC CCGATGCTTA TAAATCTATA ATTGAATCTT TTATTCATGC AGGTTCTAAA
AATGAATGTA AGGTTAAAGT AGAATATATC CACTCAGAAA GTATTTATCC AGACAATGCA
AAAGAACGTC TGGCACATCT GGATGGCGTA CTTGTAGCAC CTGGTTTTGG TAGCAGGGGT
ATTGAAGGAA AAATTGATAC CATTAAATAT GTTAGAGAAA ATAATGTTCC TTTCTTTGGT
ATCTGTTTAG GTATGCAATG TGCGGTAATT GAATTTGGAC GGAACGTACT GGGATTAAAT
GGCGCAAACA CTACCGAAAT TGATGAAGAA ACAATTCATC CTGTCATCAA TATGATGGAA
GATCAGAAAA ACATTACGGC CAAAGGGGGC ACCATGCGTT TAGGGGCTTA TCCATGTGAC
CTCAAAAAAG GCACAAAAGC TTATTCGGCT TATGGAAAAA CACATATTAC AGAGCGTCAC
AGACACCGTT ATGAATTTAA CAGTGCTTAT TTAAACCAAT TCGAAGAAGC CGGCATGATC
GCTTCGGGCG TAAATCCTGA AAGTAATCTG GTTGAAATTG TAGAGTTAAA AAACCATCCT
TTCTTTGTAG GTGGGCAGTT TCATCCCGAA TTAAAATCAA CAGTTGCTAA TCCTCACCCA
CTTTTTGTTA AATTTGTCGC CGCTGCGATG GAGTTTGCGA AGAAAAAAAC AAAATAA
 
Protein sequence
MTKYIFVTGG VTSSLGKGII SASLAKLLQA RGYSVTIQKF DPYINIDPGT LNPYEHGECY 
VTEDGAETDL DLGHYERFLN VATSQANNVT TGRIYQNVIN KERQGEYLGK TVQVVPHITD
EIKRNMRLLG ETGEYDIVIT ELGGTVGDIE SLPFIEAVRQ FKWEEGAHNA IVIHLTLIPY
LAAAGELKTK PTQHSVKALL EYGIQPDILV CRSERSISLD IRKKIALFCN VNVNAVIESL
DASTIYDVPL LMMKEQLDKT VLSKLKLAQK NEPDMERWKE FLGRLKNPTS EVKIGLVGKY
VELPDAYKSI IESFIHAGSK NECKVKVEYI HSESIYPDNA KERLAHLDGV LVAPGFGSRG
IEGKIDTIKY VRENNVPFFG ICLGMQCAVI EFGRNVLGLN GANTTEIDEE TIHPVINMME
DQKNITAKGG TMRLGAYPCD LKKGTKAYSA YGKTHITERH RHRYEFNSAY LNQFEEAGMI
ASGVNPESNL VEIVELKNHP FFVGGQFHPE LKSTVANPHP LFVKFVAAAM EFAKKKTK