| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2579 |
|---|
| Symbol | |
|---|
| ID | 8253686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 3002848 |
|---|
| End bp | 3003582 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644936229 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_003092845 |
|---|
| Protein GI | 255532473 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGTA TTTTTAAGCA AGCACACAGA ATCTATTCCA TCTTTATTAT ACTGTTGTTC
TCCTTGCTTT TTTATCCCTT CTATTACCTT GCTGCCCAAA ATCCTGGAAC CTATGGTTTA
CTGAATCAGA TGCGTAAACT GAACAGCAGG TTGTGCAGTT TTTTTATAGG AGCCATATTT
CGTTTTACCT TCGAAGAACC TCTTTCTGAC CATCAGCCTT ATATTTATTG TTCAAATCAT
ACTTCCAATC TCGACATCAT GATCTTATGT ACCCTGGCAA GGGGACGGTT TCATTTTATG
GGAAAGGATG AGCTGCTTAA AAATCCTGTA CTGAAGATAT TTTTTAAGAC GATTGATATT
CCTGTAAACC GTGAAAGTAA AATATCTGCT TTCAGGGCCT TTAAACGGGC AGGCGAAAAC
CTTGAACAGG GGATGAGCCT GATCATTTTT CCGGAAGGGA AAATAGATGA TGGACACTAT
CCGCCAAAAT TGATGCCCTT TAAAAACGGC CCTTTCAGAT TGGCCATAGA AAAGAAAATT
CCTATTGTTC CGGTCAGTTT AACCAATATC TGGAAAAGAA TGTGGGATGA TGGGGCAAAA
TATGGTTCTA CACCAGGAAT ATGTGATATT TACGTACATA AGCCGGTTTT AACTACTAAT
TTGACAATAA ATGATTCAGA TGAACTAAAA GACCGTATTT TTGAGCTGAT AAACAGTAAA
CTTGTTGATA AATGA
|
|---|
| Protein sequence | MTSIFKQAHR IYSIFIILLF SLLFYPFYYL AAQNPGTYGL LNQMRKLNSR LCSFFIGAIF
RFTFEEPLSD HQPYIYCSNH TSNLDIMILC TLARGRFHFM GKDELLKNPV LKIFFKTIDI
PVNRESKISA FRAFKRAGEN LEQGMSLIIF PEGKIDDGHY PPKLMPFKNG PFRLAIEKKI
PIVPVSLTNI WKRMWDDGAK YGSTPGICDI YVHKPVLTTN LTINDSDELK DRIFELINSK
LVDK
|
|---|
| |