Gene Phep_2578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2578 
Symbol 
ID8253685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3002561 
End bp3002851 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content41% 
IMG OID644936228 
Productglutamyl-tRNA(Gln) amidotransferase, C subunit 
Protein accessionYP_003092844 
Protein GI255532472 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 
TIGRFAM ID[TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.826771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATAG ATAAGCAAAC CATATACAAA GTGGCAGATC TGGCCCGAAT TGCTGTAAAG 
GAGGAAGAAA TTGAAGCACT GATCCCCGAT ATGAACAAGA TCCTTACTTT TATGGAAAAA
CTGAACGAGT TGGATACCCA GGGTGTTGAG CCATTGGTAT ATATGAATAT GGAAGAAAAT
GTTTGGCGTG AGGACAAGGT AAAACAGGAG ATCAGTGTGG CCGACGGACT AAAAAATGCT
GCCCGCCACA ACGAAAGCTT TTTTCTGGTG CCAAAGATTA TAGAAAAATA A
 
Protein sequence
MIIDKQTIYK VADLARIAVK EEEIEALIPD MNKILTFMEK LNELDTQGVE PLVYMNMEEN 
VWREDKVKQE ISVADGLKNA ARHNESFFLV PKIIEK