| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2568 |
|---|
| Symbol | |
|---|
| ID | 8253675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2993877 |
|---|
| End bp | 2994875 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644936218 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_003092834 |
|---|
| Protein GI | 255532462 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.364379 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGATGCTA AACTCAGCAA TTTGCAACCT CAGAAAAAAG CCATATTAAT TGCATTGTGC
ATTAGCATTG TGCTGATGCT GGCAAAATTT GTCGCCTATT TTATTACACA TTCCAATGCC
ATACTTACCG ATGCCGCAGA AAGTATTGTA AATGTACTGG CCAGCAGCTT TGCATTTTAC
AGTATTTACC TGGCTACTTT ACCTAAAGAT GAAAATCATC CTTACGGGCA TGGAAAAGTA
GAGTTTTTCT CTGCTTTTAT AGAAGGTACA CTCATTGCCA TTGCGGGCAT TATTATCGTC
TTTAAGTCGG GCTACGACCT GATATATCCC AAACCCATTA CACAGCTTTT TGAAGGTGCC
AGTATTATCG GGGCCACAGG ACTGGTTAAT CTTTTCATAG GGTATTATCT GATCAATACC
GGTAAAAAGC ATAAATCCAT TACCCTCGAA GCAGATGGAA AGCACCTCTT AACTGATGCC
ATTACCAGTG CAGGCCTGGT TATAGGAATT GTACTGATCA AGCTTACTGC AATTTACTGG
ATGGACAGTG TCATCTCTAT GTTGCTGGGA TTATATATCA TTTACAATGG CTATAAGCTT
ACCAGAAGAT CGGTAGGTGG ATTAATGGAT GAGAGCAATA TCGACCTGGT AGAGACCATC
ATCAACATCC TGCAAAAAAA CAGGAAAGAG CCCTGGATAG ATGTACACAA TTTAAGGGCA
CAGCAATATG GGGCAGACCT GCACATCGAT TGCCACATTA CCCTGCCTTA TTATTTTGAC
CTGAACCAGG TACACCAGGA GATCTCGGAA ATAGATAAAA TGATCAATGG AAATGCAGAT
AGAAAGACGG AATTGTTTAT CCATGCCGAT CCTTGTCTGC CTGCCTGTTG TAATTATTGT
AAAATGAAAG AATGTCCGGT AAGGCAGGAG CCTTTCAGGG GCGAGATTAA GTGGACAGTT
GAAAACGCAA CCAAGAACCA AAAACATTTT GACCAGTAA
|
|---|
| Protein sequence | MDAKLSNLQP QKKAILIALC ISIVLMLAKF VAYFITHSNA ILTDAAESIV NVLASSFAFY
SIYLATLPKD ENHPYGHGKV EFFSAFIEGT LIAIAGIIIV FKSGYDLIYP KPITQLFEGA
SIIGATGLVN LFIGYYLINT GKKHKSITLE ADGKHLLTDA ITSAGLVIGI VLIKLTAIYW
MDSVISMLLG LYIIYNGYKL TRRSVGGLMD ESNIDLVETI INILQKNRKE PWIDVHNLRA
QQYGADLHID CHITLPYYFD LNQVHQEISE IDKMINGNAD RKTELFIHAD PCLPACCNYC
KMKECPVRQE PFRGEIKWTV ENATKNQKHF DQ
|
|---|
| |