Gene Phep_2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2567 
Symbol 
ID8253674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2993437 
End bp2993877 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content38% 
IMG OID644936217 
ProductNUDIX hydrolase 
Protein accessionYP_003092833 
Protein GI255532461 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.748764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATT TTAACGTTAG GGTATACGGT TTATTGATAA ACCACAACAA TCAGGTATTG 
GTTAGTGATG AGCAATCTGG TGGCCGCATT TTCAGTAAAT TTCCCGGTGG CGGGCTCGAA
CTTGGCGAAG GTCTTATAGA TGCATTAAAA CGGGAATTTA TGGAAGAATG TAATGCAGAA
ATTGAAGTGC TGGGTCATTT GTATACTACT GATTTTTATG AACAGTCGTC TTTTAATGAT
AGCCAGATAC TGAGTATATA TTACCTTGTA AGGTCGGTTG AGCCCCTAAT GCTCAACTTC
AAAACAAAGG CTTTTGATTT TGAGGATGGC GCTTTGCAAT CGTTCAGATG GATTGACCTG
GATAAACTTA AACCTGATGA CGTAACCTTT AAAACGGATA AAACTGTGGT GGAAATATTA
TTGAAACAAT ACACGCTATG A
 
Protein sequence
MSYFNVRVYG LLINHNNQVL VSDEQSGGRI FSKFPGGGLE LGEGLIDALK REFMEECNAE 
IEVLGHLYTT DFYEQSSFND SQILSIYYLV RSVEPLMLNF KTKAFDFEDG ALQSFRWIDL
DKLKPDDVTF KTDKTVVEIL LKQYTL