Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2563 |
Symbol | |
ID | 8253670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2988391 |
End bp | 2990913 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644936213 |
Product | DEAD/H associated domain protein |
Protein accession | YP_003092829 |
Protein GI | 255532457 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGG AAACAAGTAA AGGATACAAA CAGGTAATTA AATGGCTGAA AAGCAACAGG AAAAAGCCCT TTAAATTCCA GACAGATGCC TGGCAATATT ATGCCGAGGG GTACAGCGGC CTGGTAAATG CACCTACCGG ATTTGGTAAA ACCTTTTCTA TTTTTCTAGC AGCTGTAATT GATGAGCTGA ATACCCGGGC CGGTCTGGAA AAACGGCAGG CTAAAAAGAA AGCAATGGTA AAACGGACTT CCGGATTAAA ATTAATGTGG ATTACCCCAC TCCGTTCATT GGCAAAAGAC CTGGCCCGTG CCATGCGTGA GGTTTGCATG GAACTGGAAT TGGACTGGCA TATTGGCGTA CGCAACGGCG ATACCCCGCA AAATGAAAAA CTGAAACAAA AAAAAGCAAT GCCAGAGGTA TTGATCATTA CCCCGGAAAG CATCCATTTA TTGCTTGCCC AGAAAAATAC GCATAGCTAT TTTGACCAGC TGCAATGTAT TGTGGCCGAT GAATGGCACG AGCTTTTGGG CAGCAAACGC GGGGTAATGA CCGAACTGGG CATATCCAGG ATCAAAGGCC TGCTGAAAGA AAGGCATCCG GAAAGGTTAC TCCGGATATG GGGCATATCG GCCACTATCG GTAATATGGA ACAGGCCATG GAAGTGCTGG TACCTTATCC CGATGTACCG AAGACCATTG TTAAGGCCGA CCTTGAAAAG AAAATTGACA TCCGTTCTAT TTTACCGGAC CATATTGATC TATTGCCATG GGCCGGACAC CTTGGACATA AACTGGCAGA GAAACTGTTG CCCATAATTT ACAAAAGTAA AACCACACTG ATATTTACCA ATACCCGGGG CCAGGCTGAA CTCTGGTACC AGACCTTGCT GGCCCTGGAT GAAAACCTGG CAGGCCTGTT GGCCATCCAT CATGGTTCTA TCGACTACGA GCTAAGGAAC TGGATTGAAG ACGCACTCCA TTCAGGCTCC CTGAAAGCAG TGATCAGCAC TTCATCCTTA GATCTGGGTG TAGATTTTAA GCCTGTAGAT ACGGTGGTAC AGATCGGCTC GCCCAAAGGG GTAGCCCGTT TTTTACAGCG GGCCGGGCGC AGCGGACACT CACCTTACGA AACATCGACC ATTTATTTTT TACCCACACA TGCCCTGGAA CTGGTAGAAG CAGCCGCCAT TAAAGAGGCT GCAAAAACGC AGGATATAGA AAGCCGTGAA CCTGTCGTCA TGGCTTTTGA CACGCTGATC CAGTACCTGG TTACACTTGC CGTTGGCGAT GGCTTTGATG AAGCCAGGCT TTTTTTTGAA GTGAAAGAAA CTTATGCTTT TAGTGAATTG CTGCCGCAGG AATGGAGCTG GATCATGCAG TTTATTACTA CCGGAGGTGA CAGTTTAACC GCTTACAATG AATTTAGTAA GGTGAGCCTG GTTGATGGAC TTTGGAAAGT AGAAAGCAGG CAGACAGCCA TGCGCCATCG CCTGCACATC GGCACTATAG TGAGCGATCC GATGTTGAAA GTTAAATTCA TTACGGGTGG ATATATCGGC ATGATCGAAG AATCGTTTAT TGCAAGGATG AAACCTGGTA GCAGTTTTAC ACTGGCCGGA AGGGTACTTG AATTTATTAT GGTCAAAGAG ATGACAGTTG TGGTACGCAA AAGTAAAGTG AAAAGGGCCA TTACCCCCAG CTGGATGGGT GGCCGCATCT CATTAACTGC CAACCTGGGT GCCATATTGC GAAAAAAATA CAATGAAACG CTTTACAAAA CACATCAGGA TATAGAACTG GACTTCATTT TTCCTTTATT TCAAAAACAG GAAAAAGTAT CTCATGTACC CAGGGACGAT GAATTCCTGA TAGAACTGAT TGCCACAAAA GATGGACATC ACCTGTTTGC TTATCCTTTT GAAGGCCGGC AGGTACATGA AATCATGGCG GCACTGATTG CTTACCGTCT GGGCAAAACC ACCCCTATTT CTTTTTCTAT AGCCATGAAT GATTATGGTT TTGAGCTGTT GAGTGAACAA CCCATCCCTG TGGAAGAAAA CGACATTAAA AACTTGTTCA GTCCGAAAAA CCTGGCGGAA GATATTGTGG CCAGCATCAA TGCCACAGAA ATGGCAAGAC GCAAATTCAG GGACATCGCC TGCATTTCAG GGCTGGTATT TCAGGGTTTC CCAGGAAAGT ACATTGCAAA TAAACATTTA CAATCTTCGG CAGCCTTGTT TTTTAATGTA TTTAGCGATT ACGACCATCA CAATTTGCTA CTGCGACAGG CCTATGATGA AGCTTTTTAT CAGCAGATTG AAGAACCCAG ACTGGCCGCT GCTTTACAGC GTATACAAAA CAGTAAACTT ATCGTAACCA AACCGGAAAG TTATACGCCG TTATGTTTTC CAATTAAAGT AGACAGTTTA AGGGACAGCA TGAGTTCTGA AGAATTAAGT CAGCGCATTC AAAGGATGAC CACAGAAACA GAGAAAAAAA ATAAAAAAAG ACATGAACAT TAA
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Protein sequence | MKLETSKGYK QVIKWLKSNR KKPFKFQTDA WQYYAEGYSG LVNAPTGFGK TFSIFLAAVI DELNTRAGLE KRQAKKKAMV KRTSGLKLMW ITPLRSLAKD LARAMREVCM ELELDWHIGV RNGDTPQNEK LKQKKAMPEV LIITPESIHL LLAQKNTHSY FDQLQCIVAD EWHELLGSKR GVMTELGISR IKGLLKERHP ERLLRIWGIS ATIGNMEQAM EVLVPYPDVP KTIVKADLEK KIDIRSILPD HIDLLPWAGH LGHKLAEKLL PIIYKSKTTL IFTNTRGQAE LWYQTLLALD ENLAGLLAIH HGSIDYELRN WIEDALHSGS LKAVISTSSL DLGVDFKPVD TVVQIGSPKG VARFLQRAGR SGHSPYETST IYFLPTHALE LVEAAAIKEA AKTQDIESRE PVVMAFDTLI QYLVTLAVGD GFDEARLFFE VKETYAFSEL LPQEWSWIMQ FITTGGDSLT AYNEFSKVSL VDGLWKVESR QTAMRHRLHI GTIVSDPMLK VKFITGGYIG MIEESFIARM KPGSSFTLAG RVLEFIMVKE MTVVVRKSKV KRAITPSWMG GRISLTANLG AILRKKYNET LYKTHQDIEL DFIFPLFQKQ EKVSHVPRDD EFLIELIATK DGHHLFAYPF EGRQVHEIMA ALIAYRLGKT TPISFSIAMN DYGFELLSEQ PIPVEENDIK NLFSPKNLAE DIVASINATE MARRKFRDIA CISGLVFQGF PGKYIANKHL QSSAALFFNV FSDYDHHNLL LRQAYDEAFY QQIEEPRLAA ALQRIQNSKL IVTKPESYTP LCFPIKVDSL RDSMSSEELS QRIQRMTTET EKKNKKRHEH
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