| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2560 |
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| Symbol | |
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| ID | 8253667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2982147 |
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| End bp | 2985335 |
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| Gene Length | 3189 bp |
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| Protein Length | 1062 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936210 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003092826 |
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| Protein GI | 255532454 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACAAA TGTTTGCCTT TGCTTATATG TCCCGTATAA GTCCGGCCTA CAGTAAAATA
AAACCCGGTA ATGCGGCTGT TTTTAAAAAG AATAAACCAG TTCCAATTCT TTCAAGAAAG
GATATTACCG GAACCGTGCG CGATTCTGTT GGTGTAATGC CAGGTGTATC GGTTAAAATT
AAGGGAAGTA CAAATGGTAC TACTACAGAT GGGAACGGAA GGTATATTTT AAACGTACCT
GATGAGGGCG CCAGTCTGGT ATTCTCTATG GTGGGCTATG CCACACAGGA AATCCCGGTA
AGTGGAAAAA CGGTGATCAA TGTTACCCTT AAACCTTCAC AAAATGCATT GGATGAGGTA
GTAGTGGTGG CTTTTGGGAC CCAGAAAAAA ACAGATATGG TGGGTTCGGT TACTTCCATC
AGTGCAAAAG ATCTGAAGGT TCCTTCCAGC AACCTGACTA CTGCACTGGC GGGCCGCGCG
GCGGGGATCA TTGCTTACCA GCGGAGTGGG GAACCCGGAC AGGATAATGC AGATTTCTTT
GTCAGGGGCA TTACCACTTT TGGCAGCAAT ACCAAACCGC TGATCCTGAT AGATGGGATG
GAGCTGACCT CGACAGACCT GGCCAGGCTT CAGCCGGATG ATATTGCCAG CTTTTCCATC
TTAAAAGACG CTACTTCTAC TGCTGTATAT GGCGCAAGGG GGGCTAACGG GATTATCCTG
GTTACCACCA AACAGGGGGC GGTCGGCAAA GCAAAACTGG CCCTGCGTCT GGAAAATTCT
GTTTCCAGTG CAACTAAAGA CCTGGAACTG GCTGATCCGA TCACTTATAT GCAACTTTCT
AATGAAGCCA TTTTAACCCG TAACCCACTC GGAACCCTGT TGTACTCGGA AGAAAAGATT
GCCAACACCA TTGCTGGTAA AAACCCGCTA GTATACCCGG CCAACGACTG GAAGAAAATG
ATGTTTAAAG ACAATGCCAT CACACAACGT GCCAATCTGA GCATTAGTGG TGGCGGTGGT
GTGGCCAAAT ACTTTGTTTC GGGTGCCTAT AATAAGGACA ACGGAATGCT GAATGTAGAC
AACCGCAACA ATTACAACAA CAACATAGAC CTTAAAAGTT ATACGCTGCG TTCAAATGTG
ACCATCGACG TAACCAAATC AACTGAAATG ATTGTGCGTT TAAGTGGAAA CTTTGACGAT
TATACGGGGC CAATTGATGG CGGTTCGGGC ATGTACAGAA AAGTGATGCG TTCCAATCCA
ACTTTGTTCC CGGCTTATTT TCCTATTGAT GAGCAGCATA AATTTGTAAA ACACATCATG
TACGGGAATT TTGGTGCAGG AAATTACCTG AACCCATATG CCGATATGAC TAAGGGCTAT
AAAGATTATT CCCGGTCGCT CATGCTGGCG CAACTTGAAG TAAAGCAGGA TCTCGCCGCA
CTTACCCCGG GCCTTTCTTT CCGTACCATG TTAAATACCA ACAGGACTTC CTATTTTGAT
GTGAGCAGAT CGTATAATCC TTATTTATAC ACGCTTGGAG GTTACGACCA GCTGAACAAT
ACCTACGCAA TAACCAATTT AAATGAAGAG ACCGGTACAG AATACCTGGG CTATAGTGAA
GGTGAAAAAC AGGTAGAAAC CTCTTTTTAT CTGGAATCTA TGTTCAATTA CAGCCGTAAC
TTTGATAAGC ATGGTTTAAA TGGTTTATTG GTGTACCGGA TGATGGAAAA CAGGGTGGCC
AATGCCGGAG ATCTGCAGGA ATCACTGCCT TTCAGGAACC TGGGGCTTTC TGGAAGGGCA
ACTTATTCTT ATGACAACCG GTATTTTGCC GAATTTAACT TTGGTTACAA TGGATCCGAA
CGTTTCCATG AGTCCAAACG TTTCGGCTTT TTTCCGGCAG GAGGGGTAGC CTGGAACATT
TCCAATGAAA AATTCTTTAA AGAGCTTAAA CCTATATTCA GCAATTTAAA GTTAAGGGCA
ACTTACGGTT TAATTGGTAA TGATGCCATC GGCGATAAAA AAGACCGTTT TTTTTACCTC
TCTAATGTAA ATATGAATAC CGCTGCAAGG GCTGCTGTTT TTGGTAACGG ACAGGGCCCA
ATGTTTTCTT TAAACGGTGT TTCGGTATCC AGGTACTCCA ATGCCGACAT CAGCTGGGAA
ACCGCAACCA AGAAGAACTT TGCGCTCGAG ATCGGTTTAT TTAACAAAGT AAACATCCAG
GCAGAGTATT ATACTGAAAT GCGCGACAAT ATTCTGATGA CCCGCTCAGT TCCGGTAACT
GTGGGCCTAT CGGCCCCGGT AAGGGCCAAT GTGGGTAAGG CCAGTGGCAA GGGAACGGAT
ATATCTGTTG ATTATACCGA GAATTTAAGC AATGGGATGT GGTTATCGGC AAGAGGAAAT
TTTACTTATG CCAGCAGTAA ATACCTGGTT TATGAAGAAC CCCAGTACAA TGAATTTTAT
CGCAGCCATG TAGGTTATCC GTTGAACCAA ACCTACGGTT ATATTGCTGA ACGTTTATTT
GTTGATGATG CCGAAGCATT GAACTCACCT AAACAAAACT TTGGGGAGTA TGGGGGCGGA
GACATCAAGT ATACCGATGT GAACCGTGAT GGTCAGATCA CTGATGCAGA TAAAGTGCCG
ATTGGTAACC CTACAGTTCC TCAGATCATT TATGGTTTTG GTTTTTCTAT GGGCATTAAA
AACTTCGACT TCAGTGGATT TTTCCAGGGG CTGGCCAACG AATCTTTCTG GATAGATGCA
GAGGCAACTG CGCCATTTGC CAATTACAGG ACACAAACGG AAATTGACAA TGGCACACTT
GCGGGCAAGG TGCTCAACAA CCAGTTGTTA AAGGCTTATG CCGATAGCCA CTGGTCTGAA
GACAACCGCA ATGTATACGC TTTATGGCCA AGGTTAAGTC CGGAGGTCAA TCAGAACAAT
GCACAAACCA ATACCTGGTT TATGCGCGAT GGTTCCTTTC TGCGCCTGAA AACAGTGGAA
GTAGGGTATA CCTTACCTAA AAGCTGGCAA AAAAGGGTGC GAGCCAGTAC TTTCAGGGTA
TATGCCAGCG CAACCAACCT GTTAACCTTC AGTAAGTTTA AGTTATGGGA TGTAGAAATG
GGTGGAAACG GTTTGGGCTA CCCGCTGCAA AAAGTATTTA ACCTGGGTGT AAACATTACT
TTCAATTAA
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| Protein sequence | MLQMFAFAYM SRISPAYSKI KPGNAAVFKK NKPVPILSRK DITGTVRDSV GVMPGVSVKI
KGSTNGTTTD GNGRYILNVP DEGASLVFSM VGYATQEIPV SGKTVINVTL KPSQNALDEV
VVVAFGTQKK TDMVGSVTSI SAKDLKVPSS NLTTALAGRA AGIIAYQRSG EPGQDNADFF
VRGITTFGSN TKPLILIDGM ELTSTDLARL QPDDIASFSI LKDATSTAVY GARGANGIIL
VTTKQGAVGK AKLALRLENS VSSATKDLEL ADPITYMQLS NEAILTRNPL GTLLYSEEKI
ANTIAGKNPL VYPANDWKKM MFKDNAITQR ANLSISGGGG VAKYFVSGAY NKDNGMLNVD
NRNNYNNNID LKSYTLRSNV TIDVTKSTEM IVRLSGNFDD YTGPIDGGSG MYRKVMRSNP
TLFPAYFPID EQHKFVKHIM YGNFGAGNYL NPYADMTKGY KDYSRSLMLA QLEVKQDLAA
LTPGLSFRTM LNTNRTSYFD VSRSYNPYLY TLGGYDQLNN TYAITNLNEE TGTEYLGYSE
GEKQVETSFY LESMFNYSRN FDKHGLNGLL VYRMMENRVA NAGDLQESLP FRNLGLSGRA
TYSYDNRYFA EFNFGYNGSE RFHESKRFGF FPAGGVAWNI SNEKFFKELK PIFSNLKLRA
TYGLIGNDAI GDKKDRFFYL SNVNMNTAAR AAVFGNGQGP MFSLNGVSVS RYSNADISWE
TATKKNFALE IGLFNKVNIQ AEYYTEMRDN ILMTRSVPVT VGLSAPVRAN VGKASGKGTD
ISVDYTENLS NGMWLSARGN FTYASSKYLV YEEPQYNEFY RSHVGYPLNQ TYGYIAERLF
VDDAEALNSP KQNFGEYGGG DIKYTDVNRD GQITDADKVP IGNPTVPQII YGFGFSMGIK
NFDFSGFFQG LANESFWIDA EATAPFANYR TQTEIDNGTL AGKVLNNQLL KAYADSHWSE
DNRNVYALWP RLSPEVNQNN AQTNTWFMRD GSFLRLKTVE VGYTLPKSWQ KRVRASTFRV
YASATNLLTF SKFKLWDVEM GGNGLGYPLQ KVFNLGVNIT FN
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