Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2558 |
Symbol | |
ID | 8253665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2979011 |
End bp | 2980240 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936208 |
Product | hypothetical protein |
Protein accession | YP_003092824 |
Protein GI | 255532452 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.947715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAACC ATCATTTTAT AAACAAAATA AAGATGAAGA AACTATATTT TATCACATCA GTTTTAATTG CCTCTTTATT GTACGGCTGT GCAAAAGAGG AAAGAGAAGA CCATATAGAC CCCAATGCAC CTGCGCCTGC TCAAATCAGT AATGTTACGG TAAAGGCCCA GCCTGGAGGG GCAAAGCTTT CCTATAAGAT TCCCCAGGAT GCTAATCTGG CGTATGTAAA GGCAGTATAT GAAATACAGT CCGGTGTTTT CAGGGAAGCA AAATCGTCTA TATATGCAGA TACACTAGCT TTGGTTGGTT TCGGTGATAC CAGGGAACAT GAAGTAAAAG TATATAGTGT TGGGAAAAAT GAAAAAGAAT CGGCACCTGT ACTGGTCAAA GTTATACCTC AAACCCCGCC CGTACAGTCT GTATTTTCAA CGCTGGACCT GGTTTCTACC TTTGGCGGTG TAACGGTAAG TTTTGATAAC CTGACAAAAG CCAATCTGGC TATAGAAGTA ATGGTAGATA CGACCGGACA AAATACCTGG GCCCCGGTAA GTACCTATTA TACCGCTGCA GTAAAAGGAA AATTCTCGGC CAGGGGAATG AAAAGCGAGG AGAAAAAATT TGCCGTATAT CTGCGTGATC GCTGGAACAA CAAATCGGAT ACCCTGACAA AAATGCTGAG CCCTAAATAT GAAACACAAA TACCAAAAAC AGGCTGGGTG TCTATGCAAA TGAAATTAGA CTCCTGGCAA CCGGTAAACT CCGGTTACAG TGTGTCCAAA ATATGGGATG GCAAATGGGC GGTGCTAACC GGCGATAGCT TTGCTTCGCC AAATGGTTCC CCGCTACCTT CCTGGTTTAG TATAGACTTG GGCAAGAAGG TACTGCTCAG CAGGTTTAAG GAACATCAGG CACCTACTTC ACATTTATAT ACAGGTTCGG CTGTAAAGAA GTTTGAACTG TGGGGTTCAA ATGCACCAAG TCAGGATGGT AGCTTTGATG GCTGGGTGTT ATTGGGCGCA TTTGAATCTT TTAGACCTTC AGGATTGCCG TTGGGAACAC CGGCTACAGC TGAGGATAAA AACTATGGTA ACTTTCTGGG TGAGGACTTT ATGTTTGAAG AAACACCGCC CGCTGTACGT TACCTGCGCT GGAAAACCAT AGAAACCTAT AGCAGTACCG GACAGATCGT TATCGCCGAA CTTACCTTAT TTGGCGAGAT ACAACCTTAA
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Protein sequence | MYNHHFINKI KMKKLYFITS VLIASLLYGC AKEEREDHID PNAPAPAQIS NVTVKAQPGG AKLSYKIPQD ANLAYVKAVY EIQSGVFREA KSSIYADTLA LVGFGDTREH EVKVYSVGKN EKESAPVLVK VIPQTPPVQS VFSTLDLVST FGGVTVSFDN LTKANLAIEV MVDTTGQNTW APVSTYYTAA VKGKFSARGM KSEEKKFAVY LRDRWNNKSD TLTKMLSPKY ETQIPKTGWV SMQMKLDSWQ PVNSGYSVSK IWDGKWAVLT GDSFASPNGS PLPSWFSIDL GKKVLLSRFK EHQAPTSHLY TGSAVKKFEL WGSNAPSQDG SFDGWVLLGA FESFRPSGLP LGTPATAEDK NYGNFLGEDF MFEETPPAVR YLRWKTIETY SSTGQIVIAE LTLFGEIQP
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