Gene Phep_2558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2558 
Symbol 
ID8253665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2979011 
End bp2980240 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content44% 
IMG OID644936208 
Producthypothetical protein 
Protein accessionYP_003092824 
Protein GI255532452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.947715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAACC ATCATTTTAT AAACAAAATA AAGATGAAGA AACTATATTT TATCACATCA 
GTTTTAATTG CCTCTTTATT GTACGGCTGT GCAAAAGAGG AAAGAGAAGA CCATATAGAC
CCCAATGCAC CTGCGCCTGC TCAAATCAGT AATGTTACGG TAAAGGCCCA GCCTGGAGGG
GCAAAGCTTT CCTATAAGAT TCCCCAGGAT GCTAATCTGG CGTATGTAAA GGCAGTATAT
GAAATACAGT CCGGTGTTTT CAGGGAAGCA AAATCGTCTA TATATGCAGA TACACTAGCT
TTGGTTGGTT TCGGTGATAC CAGGGAACAT GAAGTAAAAG TATATAGTGT TGGGAAAAAT
GAAAAAGAAT CGGCACCTGT ACTGGTCAAA GTTATACCTC AAACCCCGCC CGTACAGTCT
GTATTTTCAA CGCTGGACCT GGTTTCTACC TTTGGCGGTG TAACGGTAAG TTTTGATAAC
CTGACAAAAG CCAATCTGGC TATAGAAGTA ATGGTAGATA CGACCGGACA AAATACCTGG
GCCCCGGTAA GTACCTATTA TACCGCTGCA GTAAAAGGAA AATTCTCGGC CAGGGGAATG
AAAAGCGAGG AGAAAAAATT TGCCGTATAT CTGCGTGATC GCTGGAACAA CAAATCGGAT
ACCCTGACAA AAATGCTGAG CCCTAAATAT GAAACACAAA TACCAAAAAC AGGCTGGGTG
TCTATGCAAA TGAAATTAGA CTCCTGGCAA CCGGTAAACT CCGGTTACAG TGTGTCCAAA
ATATGGGATG GCAAATGGGC GGTGCTAACC GGCGATAGCT TTGCTTCGCC AAATGGTTCC
CCGCTACCTT CCTGGTTTAG TATAGACTTG GGCAAGAAGG TACTGCTCAG CAGGTTTAAG
GAACATCAGG CACCTACTTC ACATTTATAT ACAGGTTCGG CTGTAAAGAA GTTTGAACTG
TGGGGTTCAA ATGCACCAAG TCAGGATGGT AGCTTTGATG GCTGGGTGTT ATTGGGCGCA
TTTGAATCTT TTAGACCTTC AGGATTGCCG TTGGGAACAC CGGCTACAGC TGAGGATAAA
AACTATGGTA ACTTTCTGGG TGAGGACTTT ATGTTTGAAG AAACACCGCC CGCTGTACGT
TACCTGCGCT GGAAAACCAT AGAAACCTAT AGCAGTACCG GACAGATCGT TATCGCCGAA
CTTACCTTAT TTGGCGAGAT ACAACCTTAA
 
Protein sequence
MYNHHFINKI KMKKLYFITS VLIASLLYGC AKEEREDHID PNAPAPAQIS NVTVKAQPGG 
AKLSYKIPQD ANLAYVKAVY EIQSGVFREA KSSIYADTLA LVGFGDTREH EVKVYSVGKN
EKESAPVLVK VIPQTPPVQS VFSTLDLVST FGGVTVSFDN LTKANLAIEV MVDTTGQNTW
APVSTYYTAA VKGKFSARGM KSEEKKFAVY LRDRWNNKSD TLTKMLSPKY ETQIPKTGWV
SMQMKLDSWQ PVNSGYSVSK IWDGKWAVLT GDSFASPNGS PLPSWFSIDL GKKVLLSRFK
EHQAPTSHLY TGSAVKKFEL WGSNAPSQDG SFDGWVLLGA FESFRPSGLP LGTPATAEDK
NYGNFLGEDF MFEETPPAVR YLRWKTIETY SSTGQIVIAE LTLFGEIQP