| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2553 |
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| Symbol | |
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| ID | 8253660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2970347 |
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| End bp | 2972674 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936203 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003092819 |
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| Protein GI | 255532447 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.826043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATATA CCAATAGAAT TGTACTGATT CTCTTTTTGA TAGCTCAATT CCAGTTTGTA
TCTGCACAAA ATAAAAAAAC GGTTAATGGA AATGTAACGG ATGCCAAAAC AGGCGAAACA
TTGATTGGGG CAAGTGTTAA GCTTGCAGGC AATACACAGG CTGGTACTTT AACCAATGCT
TATGGCTTCT ATTCGCTGAA TACTGCCGAA GGTAATTATG AAATTGCTGT CAGTTTTATT
GGCTATAAAA CCATCAGACA AAATATCAGC ATTGCGAAAG ATACCAGGCT TAATTTTGCA
ATGGAAGAAG ACAATCAGCT CAATGAAGTA ATCATATCGG CTACAAAAAG AAACGAAAAT
GTAAGCAGTC CGCAAATGGG CCTGCAAAAG ATAGACGTCC GCGAAATCAA CAACGTGCCC
GTATTGCTGG GCGAGCGTGA TATCCTTAAA ACGATACAGT TGCTGCCCGG CATCAAATCG
GCGGGCGAGG GGAATAGTGG TTTTTATGTG CGGGGCGGGG CTACCGATCA GAACCTGATT
CTTTTAGATG AAGCACCTGT TTACAATGCC TCGCATTTAC TGGGTTTCTT CTCAACCTTT
AATTCCGACG CGATAAAAGA TGTAAGCGTT TATAAGGGAG GGATGCCTGC ACAATATGGA
GGGCGACTGG CCTCGGTACT GGATATTAAA ATGAACGATG GAAACCGTAA AACCTATACT
GCCGAAGGTG GGATAGGTCT CATTTCATCC CGTTTAAAAG TTGAAGGCCC CATTGTAAAA
GATAAAGGTT CATTTATGGT AAGTGCCCGC AGAACTTACA TGGATGCCCT TCTGTCCTTA
TCGCCAGATA GCAATATAAA CAGCAATATC CTCTTTTTTT ACGACCTGAA TGCAAAGGCC
AATTACCAGC TTGATGAAAA GAACACCCTA TATCTATCAG GGTATTTTGG CCGCGATAAA
CTGGGTATAG CTGATACCTT TGGTTTTAAC TGGGGCAATA CCACTGTTAC CCTAAGGTGG
AACCATCTGT ACAGCAACAG ATTGTTTTCT AACACTTCTC TTATTTACAG CAATTACAAT
TATGTGATCC AGAACTTTAT GGAAGAAAAT AACTTTGAGG TAAATTCTTC TATTAAAGAC
TTTAATTTAA AGCAGGATTT TGAATACAGC CTTAGCAACA GCCATAATCT GAAGTTTGGT
TTAAATGCCA TTCACCATAC CATTGCCCCT GGCAAACTAA CTGCTACAGC AACTTCAAGT
GTAAATGAAA CCAGGTATGA AGACCGCAAA GGCCTGGAAC TTGCTACCTA TATATCGGAC
GAATGGACGG TAAGCCCTAA AATGAACCTG GTTTATGGAC TACGTTTAAG CAGTTTTTCT
TTAATGGGGC CTGGCAACAT CAAAACTTAT GATGCCGAGG GTAATACCAC CGGTACCACT
ACGTATCACG CAGGCGAGTT TGTGAAAAGC TATTTTAATC TGGAACCCAG GGTTTCGGCC
AGTTATCAGC TCAGCAATTC AAGTTCCTTA AAAGCTGCCT ATACGCGCAA TGTCCAGAAT
GTGCACCTGA TGTCCAATTC AACTTCTACT TCTCCTACAG ATCTGTACAT CATGAACAGC
AATAATGTAA AACCAGAAAT TGCTGATCAG ATTGCAGGGG GCTATTTCCG TAATTTTAAC
GACGATAATT ACGAGTTTTC TGCAGAAGTT TATTATAAGT GGATGCAAAA CCAGATCGAA
TACCGGAGTG GTACAGATTT GCGTGGCAAT GCAAATGTAG AAGCTGATTT GTTGTACGGT
GATGGCCGGG CTTACGGATT GGAGCTGTTT TTTAAGAAAA GGTTTGGCCG GTTTAACGGA
TGGATAGGTT ATACCTGGTC GCGTACGGAG CGGCAATTTG ATGCCTTTAA CAATGGCAAA
TGGTTTTATG CAAAACAGGA CAGAACGCAT GACCTGTCGC TTGTAGGTAT TTATAAAGCG
AGTACACGCT GGACTTTCTC CTCTGTCTTT GTGTATAACA CCGGTAATGC CGTCACCTTT
CCAAGTGGCA AATACCAGAT CAACGGGCGC ACCGTTTTTT ATTATACTGA AAAGAACAGT
TACCGCACAC CGGCATACCA TCGTTTAGAT GTATCGGCCA CACTCGAAGG GAAACCGGGC
AGAAAGCTGC AGTCCAGCTG GTCTTTCGGA ATCTATAATT TATATAACCG TCAAAATGCA
TTTTCTATAG ATTTTAAGGA TGATCCGGAT GATGCAACCA AAACACAGGC TGTACGGACA
ACCTTATTTG GTATTATCCC TTCTGTAACC TGGAACTTTA AATTTTAG
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| Protein sequence | MPYTNRIVLI LFLIAQFQFV SAQNKKTVNG NVTDAKTGET LIGASVKLAG NTQAGTLTNA
YGFYSLNTAE GNYEIAVSFI GYKTIRQNIS IAKDTRLNFA MEEDNQLNEV IISATKRNEN
VSSPQMGLQK IDVREINNVP VLLGERDILK TIQLLPGIKS AGEGNSGFYV RGGATDQNLI
LLDEAPVYNA SHLLGFFSTF NSDAIKDVSV YKGGMPAQYG GRLASVLDIK MNDGNRKTYT
AEGGIGLISS RLKVEGPIVK DKGSFMVSAR RTYMDALLSL SPDSNINSNI LFFYDLNAKA
NYQLDEKNTL YLSGYFGRDK LGIADTFGFN WGNTTVTLRW NHLYSNRLFS NTSLIYSNYN
YVIQNFMEEN NFEVNSSIKD FNLKQDFEYS LSNSHNLKFG LNAIHHTIAP GKLTATATSS
VNETRYEDRK GLELATYISD EWTVSPKMNL VYGLRLSSFS LMGPGNIKTY DAEGNTTGTT
TYHAGEFVKS YFNLEPRVSA SYQLSNSSSL KAAYTRNVQN VHLMSNSTST SPTDLYIMNS
NNVKPEIADQ IAGGYFRNFN DDNYEFSAEV YYKWMQNQIE YRSGTDLRGN ANVEADLLYG
DGRAYGLELF FKKRFGRFNG WIGYTWSRTE RQFDAFNNGK WFYAKQDRTH DLSLVGIYKA
STRWTFSSVF VYNTGNAVTF PSGKYQINGR TVFYYTEKNS YRTPAYHRLD VSATLEGKPG
RKLQSSWSFG IYNLYNRQNA FSIDFKDDPD DATKTQAVRT TLFGIIPSVT WNFKF
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