Gene Phep_2549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2549 
Symbol 
ID8253656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2965202 
End bp2967379 
Gene Length2178 bp 
Protein Length725 aa 
Translation table11 
GC content43% 
IMG OID644936199 
Productpeptidase S9B dipeptidylpeptidase IV domain protein 
Protein accessionYP_003092815 
Protein GI255532443 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCA GAAACATCGT GTTTAAACTA GCGCTGGCCC TGTTAATTGG CTTTTGCAGT 
AAAACCCATG CACAAAATAG ACCTGAACTT AAGTGGACTA AAGATGGGAA TGCGTATTAC
CAGTTTACGG ATGGGGAGCT GGTATCCATT TCACTGGCCC AGAATGAACG TAAAACCATT
ATAAGCCGCG ATTTGCTTTA TACCTCTGGC CAGCATACCA TCGGCAGAAT TAAAGATTTT
TTCTTTTCTG AAGATGGCAG CAAAGTGCTC ATTTACACCA ATAGCAAAAA AGTTTGGCGG
TATGAAACCC GTGGCGATTA TTTTGTGGCC GATTTAAAAG CAAATACAAT TACACAGGTT
GGAAAAGATA AACCCGCATC ATCACTCATG TTTGCAAAAT TCTCGCCCGA TGGCAATAAA
GTTGCCTATG TTAGTAAACA CAATCTGTAT GTAGACGATC TGATGGCCAA AAGTACCAAA
GCACTAACTA CCGACGGAAC AGAACGCCTG ATCAATGGTA CATTCGATTG GGTATATGAA
GAAGAATTCG ACTGCCGGGA TGGTTTCAGG TGGAGTCCAG ACGGACAATC TATCGCCTAT
TGGCAAATTG ATGCCACAAA AATCAAAAAC TTTCTGATGA TAGACAATAC AGATTCTATC
TATCCTTTTA CCATACCTGT AGAATATCCT AAAGTAGGTG AAGACCCGTC TTCCTGTAAG
GTTGGTGTAG TAAATATTGC CTCAGCGCAA ACCAAATGGC TCAATATTCC CGGTGATGCG
ATCCAAAACT ACATCCCAAG AATGGGTTGG ATACCTGGTT CCAACGAAGT CATTTTACAG
CAGCTAAACA GGGAGCAAAA TGTAAGCAAG CTATTTGTAG CCAATGCGGC TACAGGTGTA
GCCCAGAACA TCCTTACCGA AACAGATCAG GCCTGGATAG ATGCGGCCGA TGAAAACTGG
GAATGGGTGA ATGAAAACAA GGAGTTCATC TGGATGAGCG AAAAAGACGG GTGGCGCCAC
GCCTACCGCA TCAGTAAAGA CGGGAAAAGG CAGACCCTGA TCACCAAAGG CGATTTCGAT
GTTATTGAAA AATCATTGGT TGACGAGAAA AACAACTCCC TTTATTATAT GGCATCTCCG
GGTAATGCCA CACAAAAATA CCTGTACAAA ACAAAATTAA GCGGTGGGTC AAAGCCGGAA
ATGGTCACCC CTTCTATCCT GCCGGGCACC CATAATTACG ACATCTCTCC AAATGGCATT
TATGCCCGTC ATACCTATAC CACTGCCTCT GTGCCCTTAA TTACCGAATG GATGAAGCTG
ACTACCTTAA ATCCACTAAC CATGGATGGC AGTATCACCA ATCAGTTAGG CCGAATAAGA
CCACCTAAAA ATAAGGTAGA ATTTTTTAAG GTAACTACCG AAGATGGGAT AGAACTGGAT
GGCTGGATGA AAAAACCTGA TAATTTTGAT CAGACCAAAA AATATCCTGT TGTATTTTAT
GTATATGGCG AACCGGCCTC ACAAACAGTT AAAGATGAGT TTGGTACAGG CATTAACCGG
CTATATGCAG GTGATATGCC AAAAGACGGC TATATCTATA TCTCCGTAGA AAACAGGGGT
GCACCAGCAC CCAAAGGACG TGAATGGCGT AAAAGCATTT ACAAAAACAT TGGTTTGCTG
AACATCCGTG ATCAGGCAAT GGCTGCTAAA AAGATTTTAC AATGGCCATT TGTTGATAAA
GACCGCGTGG CCGTTTGGGG CTGGAGCGGT GGTGGTTCAT CTACCCTAAA CCTGATGTTC
CAATATCCTG AAATTTATAA AACAGGCATA GCTATTGCCG CAGTGGCCAA CCAGCTCACT
TACGATAACA TTTATCAGGA ACGTTATATG GGTTCTCCTT TAAAAACAAA AGAGGCATAC
ATTAAAGGTT CACCGGTTAC TTATGCCAAA AACCTTCAGG GAAACCTGCT GTACATCCAT
GGTACAGGTG ATGACAATGT CCACTATCAG AATGCAGAAA TGCTGATCAA TGAACTGATC
AGAAACAAAA AAGTGTTTCA ACTGATGTCG TACCCCAACC GCACACACAG CATTAACGAG
GGCGAAAACA CCTCAGCGCA CCTTGCATTA ACCTATACAG AGTTTTTAAG GCGTAACTGT
CCTCCCGGAG GGAGATAA
 
Protein sequence
MNFRNIVFKL ALALLIGFCS KTHAQNRPEL KWTKDGNAYY QFTDGELVSI SLAQNERKTI 
ISRDLLYTSG QHTIGRIKDF FFSEDGSKVL IYTNSKKVWR YETRGDYFVA DLKANTITQV
GKDKPASSLM FAKFSPDGNK VAYVSKHNLY VDDLMAKSTK ALTTDGTERL INGTFDWVYE
EEFDCRDGFR WSPDGQSIAY WQIDATKIKN FLMIDNTDSI YPFTIPVEYP KVGEDPSSCK
VGVVNIASAQ TKWLNIPGDA IQNYIPRMGW IPGSNEVILQ QLNREQNVSK LFVANAATGV
AQNILTETDQ AWIDAADENW EWVNENKEFI WMSEKDGWRH AYRISKDGKR QTLITKGDFD
VIEKSLVDEK NNSLYYMASP GNATQKYLYK TKLSGGSKPE MVTPSILPGT HNYDISPNGI
YARHTYTTAS VPLITEWMKL TTLNPLTMDG SITNQLGRIR PPKNKVEFFK VTTEDGIELD
GWMKKPDNFD QTKKYPVVFY VYGEPASQTV KDEFGTGINR LYAGDMPKDG YIYISVENRG
APAPKGREWR KSIYKNIGLL NIRDQAMAAK KILQWPFVDK DRVAVWGWSG GGSSTLNLMF
QYPEIYKTGI AIAAVANQLT YDNIYQERYM GSPLKTKEAY IKGSPVTYAK NLQGNLLYIH
GTGDDNVHYQ NAEMLINELI RNKKVFQLMS YPNRTHSINE GENTSAHLAL TYTEFLRRNC
PPGGR