Gene Phep_2545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2545 
Symbol 
ID8253652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2960929 
End bp2961657 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content44% 
IMG OID644936195 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_003092811 
Protein GI255532439 
COG category[I] Lipid transport and metabolism 
COG ID[COG0671] Membrane-associated phospholipid phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGC TACAGGATAC TTTATTGTTG ACAGCAATGC CAAACAGCTA TAAGTATACG 
GGTATGGAAC CCTATAAGCC AGGTTTTACT CCTTTTATAA TTCCGGCAGC ATTTATTGGC
TATGGTGTAA TTACACTTGC CGGAGATAAC CTGATCCGGA GGCTGGATTA TAGCACCAGA
AATGAGTTAC AGGAAGACCA TCCCTTATTT GCTGCGCATG CAGACGATTA TATGCAGTTT
GCCCCGGCAG TGGCTGTTTA CGGGTTAAAT CTGGCTGGCA TAAAAGGAAA ACACAGCTTG
CTGGATGCTA CAGGTATATA CGTATTGTCT TCCGCCATTA TGGGCGGTTC TGTTTCTATC
TTAAAGCGTG CCACACATAG AGAACGCCCA GATGGCTCTG GTTTTAATTC TTTCCCTTCA
GGACATACCG CCAATGCTTT TGCCGCGGCC GAGTTTTTAA AGCAGGAATA TAAAGATATT
TCGTCCTGGT ATGGTGTGGC TGGTTATGCG GTGGCAACGG CTACCGGAAC ACTCAGGATG
TATAACAATA AACATTGGTT TAGTGACGTA GTAGCGGGGG CTGGTGTTGG TATTCTGTCT
GCCAAAATAG CTTATTTAGT TTATCCCAAG TTAAAAAGAC TGGTGCTCGG TAAAAGTACT
TTGCAGTATA ATGTTGTACC TTCCTATCAG CAACATAGTA TTGGACTCTC ATTGAATGGA
ACATTTTAA
 
Protein sequence
MAQLQDTLLL TAMPNSYKYT GMEPYKPGFT PFIIPAAFIG YGVITLAGDN LIRRLDYSTR 
NELQEDHPLF AAHADDYMQF APAVAVYGLN LAGIKGKHSL LDATGIYVLS SAIMGGSVSI
LKRATHRERP DGSGFNSFPS GHTANAFAAA EFLKQEYKDI SSWYGVAGYA VATATGTLRM
YNNKHWFSDV VAGAGVGILS AKIAYLVYPK LKRLVLGKST LQYNVVPSYQ QHSIGLSLNG
TF