Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2545 |
Symbol | |
ID | 8253652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2960929 |
End bp | 2961657 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936195 |
Product | phosphoesterase PA-phosphatase related |
Protein accession | YP_003092811 |
Protein GI | 255532439 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAGC TACAGGATAC TTTATTGTTG ACAGCAATGC CAAACAGCTA TAAGTATACG GGTATGGAAC CCTATAAGCC AGGTTTTACT CCTTTTATAA TTCCGGCAGC ATTTATTGGC TATGGTGTAA TTACACTTGC CGGAGATAAC CTGATCCGGA GGCTGGATTA TAGCACCAGA AATGAGTTAC AGGAAGACCA TCCCTTATTT GCTGCGCATG CAGACGATTA TATGCAGTTT GCCCCGGCAG TGGCTGTTTA CGGGTTAAAT CTGGCTGGCA TAAAAGGAAA ACACAGCTTG CTGGATGCTA CAGGTATATA CGTATTGTCT TCCGCCATTA TGGGCGGTTC TGTTTCTATC TTAAAGCGTG CCACACATAG AGAACGCCCA GATGGCTCTG GTTTTAATTC TTTCCCTTCA GGACATACCG CCAATGCTTT TGCCGCGGCC GAGTTTTTAA AGCAGGAATA TAAAGATATT TCGTCCTGGT ATGGTGTGGC TGGTTATGCG GTGGCAACGG CTACCGGAAC ACTCAGGATG TATAACAATA AACATTGGTT TAGTGACGTA GTAGCGGGGG CTGGTGTTGG TATTCTGTCT GCCAAAATAG CTTATTTAGT TTATCCCAAG TTAAAAAGAC TGGTGCTCGG TAAAAGTACT TTGCAGTATA ATGTTGTACC TTCCTATCAG CAACATAGTA TTGGACTCTC ATTGAATGGA ACATTTTAA
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Protein sequence | MAQLQDTLLL TAMPNSYKYT GMEPYKPGFT PFIIPAAFIG YGVITLAGDN LIRRLDYSTR NELQEDHPLF AAHADDYMQF APAVAVYGLN LAGIKGKHSL LDATGIYVLS SAIMGGSVSI LKRATHRERP DGSGFNSFPS GHTANAFAAA EFLKQEYKDI SSWYGVAGYA VATATGTLRM YNNKHWFSDV VAGAGVGILS AKIAYLVYPK LKRLVLGKST LQYNVVPSYQ QHSIGLSLNG TF
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