Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2542 |
Symbol | |
ID | 8253649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2955725 |
End bp | 2958745 |
Gene Length | 3021 bp |
Protein Length | 1006 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644936192 |
Product | acriflavin resistance protein |
Protein accession | YP_003092808 |
Protein GI | 255532436 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00165713 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAACT TCTTTATCTC TCATAAGAAT CCCCTGTTGG TTATACTGAT CTTGGTACTA ACAGGTGGCT GTTATGTTTT TTTTCAGCTA AAAACATCAC TTTTCCCGGA AATTACTTTC CCAAAAGTAA AGATCATTGC CGAGGCCGAA CTGCAGCCGG TTGATAAAAT GGTGGTAACA GTTACCAGGC CACTTGAAAA TGCGGTGAAG CAGGTGCCCG ATTTAAAGCT GGTCAGAAGT AATACCAGCC GGGGCAGCTG TGAAATATCG GCCTACATGA ACAGCAATGC GAACATCGAT CTGAGCCAGC AAAGGATAGA ATCGCAAATT GCCAAGATCA GTGCTACGCT TCCGCCGGGA ATTAATATAT CTGTCGAAAG GATGAACCCA TCTATATTGC CGGTAAGTGG ATATAGCCTG GAAAGCAACA CCAAATCGGC TATAGAACTT AAACAATTGG CTACGTATAC GGTTAAACCT TTTTTGTCGC AGGTAGATGG TGTTTCCGAG ATCAGGATCA TAGGCGGTAA AACAAAAGAA TACTGGCTGG AACTGGACGA ACAAAAAATG GCAGCCTTAT CCATATCCCC TGAAACGGTG AGCTCCATTT TAGCACAGAC AAATTTTATA AAATCAAATG GATATCTTTC GGATCACAAC TTTTTGTATC TGTCCGTTAC TGATGCTACA GTTAAAACCA GGGCACAACT GGAAGACCTG ACCATTGGTA AAATGGGGAA CCGCATGATA AGGGTTAAAG ATATTGCACA GGTTAAAATA CAGGAAGGTG TAACCTATAC CAGGGTGAAT GCAAATGGCA GGGAAGGGAT CCTGGTTGCG GTAATTAAAC AGCCCAATGC GAACCTGGTG GACCTGTCTG ATCAGATGGA GCTGAAGATA AATACCCTTA AAAAAATCCT CCCGGCAGGG GTAAACATAA AGCCCTATTA TGTGCAGGCC GATTTTGTAA ATGAATCGGT AAAAAGTGTA AGGGATAGCC TGCTGATAGG TTTGGGGCTT GCAATTGTAG TTGCCATTAT CTTTTTAAGA TCTTTAAAGG CCAGTGCCAC CATACTGATT ACCATACCTG TAACCTTGTG TCTGACACTT ATTGTTTTAT ACCTGGTAGG CTACTCTTTA AATATCATGA CGCTGGGTGC TATAGCAGCC GCTATTGGTC TGATCATTGA TGATGCGATT GTGGTTGTAG AGCAAATTCA CCGGACGCAT GAAGAGCATC CTGAAGAACC CACAGTAACA CTCCTGAAAA AGGCCATCGA TTATCTTTTT CCGGCAATGC TGGGCTCATC TGTAAGTACA ATAGTTATAT TTATACCTTT TGTATTAATG ACCGGTGTGG CTGGTTCTTA TTTTCAGGTG ATGACCAATA CCATGATTAT TACGCTGATC TGTTCGTTTT TTGTAACCTG GATTGGTTTA CCGGTAGTCT ATCTGCTGCT TACACGGGAT GCGGGGTTAA ATACGGTGGG TAAAAAAAGG GAAATGCATC CTGTTAAGAC CCAGAAATGG ATCAGCTATT TTATACACCG GCCATATATC AGCATGATTG GCGTACTGTT ACTTGTTGCT GCTATTGTTT TTATTTATCC GCGACTTGAA ACAGGGTTTT TATCTGAAAT GGATGAGGGG AGTATCGTAC TGGACTATAA TTCTCCGCCA GGTACATCTT TGACCGAGAC CGACAGGATG CTTAAAGGGA TAGAAAAAGA ATTGGTGAAG ATACCAGAAG TTGCCGCTTA TTCGAGAAGG ACAGGTACAC AGATGGGTTT TTTTATTACC GAACCCAACA CGGGTGATTA CCTGATCCAG CTGAAAGCAA ACAGGACCAA AAGTACGGAT GAAGTGATTG CAGAAATCAG GCGTATGATC GAAAGTACCC AGCCGGCATT GGTGATAGAT TTTGGACAGG TGATTGGGGA TATGCTGGGC GACCTTATGA GTTCTACCCA GCCTGTTGAA CTGAAAATAT TTGGTAACGA TCAGAAAAAG TTACAGGCTT TGTCGAAAAA GGTAGCTGTC ATGATTACCG GGATAGCAGG TGTCGCCGAT GTGTTTGACG GTATTGTCTT ATCTGGTCCT ACAGTAAATA TACAACCCGA TTTTTCTGCA CTGGCGCAAT ATGGCGTTAG TCCGGCCAGC TTTCAGTTCC AGGTGCAAAC CGCTTTGGAA GGTAATATAA TTGGAAATTT GTATGATCAG CAGCAACTGT CCCCCATCCG GATGATCTAT CCGGGAAGCA GGCAATTTGG TATCTCCAAT ATAGAGGGAC TGAAAATATT TATGCCGAAT GGAAAAACTG TTCCCATTCA GGGACTGGCC AGGGTAACAC TAAGCGGAGG TAGTGCCGAA GTATCAAGGG AAAATTTGCA ATCCATCGGT GTGGTTACTG CCCGTTTGGA CAACAGGGAC CTGGGGAGTG TAATGAAGGA CATCCAAAGA GAAGTGGCTG CAAACATCAC CTTGCCTGCC GGTTATCACA TCGAATATGG TGGGGCTTAT GCCGAACAGC AGCAATCGTT CAGAGAATTG CTGACCATAC TTATAGCTTC CAGTTTACTG GTATTTAGTG TGATCCTGTT TTTATTTAAA GATTTTAAAA TTGCATTTCT GATTTTATTT ATCGCAGTAC TAGGTATATC GGGTAGCTAC CTTGCCTTGT TTATCACGCA CACCCCTTTA AACGTTGGCA GTTATACGGG GCTGATCATG ATTGTTGGGA TCATTGCAGA AAATGCAGTG TTTACTTTTT TACAATTTAA AGAATCTTTG ACCATCATGA ATGTTGATGA TTCCATTACT TATGCCATTT CAACACGTCT AAGACCCAAG TTGATGACTG CTCTGGGGGC TATAATTGCA CTGTTCCCTT TAACCCTGGG CATTGGCGCC GGTGCCCAGC TGCATCAGCC GCTTGCTATA GCGGTTACGG GAGGTTTTAT TGTTGGTCTT CCGCTATTGC TGGTAGTTTT ACCGAGTATG ATCAGGAAGC TGTACCATTA A
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Protein sequence | MKNFFISHKN PLLVILILVL TGGCYVFFQL KTSLFPEITF PKVKIIAEAE LQPVDKMVVT VTRPLENAVK QVPDLKLVRS NTSRGSCEIS AYMNSNANID LSQQRIESQI AKISATLPPG INISVERMNP SILPVSGYSL ESNTKSAIEL KQLATYTVKP FLSQVDGVSE IRIIGGKTKE YWLELDEQKM AALSISPETV SSILAQTNFI KSNGYLSDHN FLYLSVTDAT VKTRAQLEDL TIGKMGNRMI RVKDIAQVKI QEGVTYTRVN ANGREGILVA VIKQPNANLV DLSDQMELKI NTLKKILPAG VNIKPYYVQA DFVNESVKSV RDSLLIGLGL AIVVAIIFLR SLKASATILI TIPVTLCLTL IVLYLVGYSL NIMTLGAIAA AIGLIIDDAI VVVEQIHRTH EEHPEEPTVT LLKKAIDYLF PAMLGSSVST IVIFIPFVLM TGVAGSYFQV MTNTMIITLI CSFFVTWIGL PVVYLLLTRD AGLNTVGKKR EMHPVKTQKW ISYFIHRPYI SMIGVLLLVA AIVFIYPRLE TGFLSEMDEG SIVLDYNSPP GTSLTETDRM LKGIEKELVK IPEVAAYSRR TGTQMGFFIT EPNTGDYLIQ LKANRTKSTD EVIAEIRRMI ESTQPALVID FGQVIGDMLG DLMSSTQPVE LKIFGNDQKK LQALSKKVAV MITGIAGVAD VFDGIVLSGP TVNIQPDFSA LAQYGVSPAS FQFQVQTALE GNIIGNLYDQ QQLSPIRMIY PGSRQFGISN IEGLKIFMPN GKTVPIQGLA RVTLSGGSAE VSRENLQSIG VVTARLDNRD LGSVMKDIQR EVAANITLPA GYHIEYGGAY AEQQQSFREL LTILIASSLL VFSVILFLFK DFKIAFLILF IAVLGISGSY LALFITHTPL NVGSYTGLIM IVGIIAENAV FTFLQFKESL TIMNVDDSIT YAISTRLRPK LMTALGAIIA LFPLTLGIGA GAQLHQPLAI AVTGGFIVGL PLLLVVLPSM IRKLYH
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