| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2532 |
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| Symbol | |
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| ID | 8253639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2941243 |
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| End bp | 2941830 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644936182 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003092798 |
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| Protein GI | 255532426 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTTCTT ATGGTACGCA TAGCGATAAT GAACTGGCTG TTCTGCTAAA AGAAGCAGAC
AAAGATGCCT ATACGGAGAT TTATAACCGG TACTGGAAGA AAATGTTACT GCTGGCCTGG
AACCATTGTA AGGATAAATC ACATGCTGAA GATATTGTAC ATGAGGTTTT TATCGCCTTG
TGGAACAGGA GGGACGGGGA CTTGATAATG AATGTTCCTG GATTTTTAAC AACAGCCATA
AAATTTAATA TTTTTAAACA TTACCAGAAA GTGCAGCAGC GTAAACAACT GGCCCTTAAA
AATTATGAAT TTAAAGAAAG TAGCTATGAT GAGGATAAAC TCGATGCCCT GTTTCTTAAA
GAATACATCA ACGGCATTGT AGAGCAGCTT CCTGAAAAAT GTCGTCTTAC CTTTAAATAC
AGCCGGGAAG AGGGGCTGAA TAATGCTGAA ATTGCTGATA GGATGAATAT TTCGGAAAAA
GGAGTAGAGG CCAATTTAAC ACGTGCCCTG AAAATAATTA GGGGAAACCT CAAAGATTCC
GGTCTGCTCT TGCTGTTGTC GTCCGTACTC TGGAAAAATT TATTTTAA
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| Protein sequence | MVSYGTHSDN ELAVLLKEAD KDAYTEIYNR YWKKMLLLAW NHCKDKSHAE DIVHEVFIAL
WNRRDGDLIM NVPGFLTTAI KFNIFKHYQK VQQRKQLALK NYEFKESSYD EDKLDALFLK
EYINGIVEQL PEKCRLTFKY SREEGLNNAE IADRMNISEK GVEANLTRAL KIIRGNLKDS
GLLLLLSSVL WKNLF
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