| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2529 |
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| Symbol | |
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| ID | 8253636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2934579 |
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| End bp | 2936318 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936179 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003092795 |
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| Protein GI | 255532423 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.500869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACG AAAATACATC ATATAAAAAC CGCAGGTCAT TTTTACGTGA AGCCACATTC
TATGGCCTGT CCTCCTTCAT CGCCATGCCT GCCCTGGCTT CCCTGTTAAG CGGATGCTCC
AAGGATTTTT TAGATCGTCA GCCGCTGGAT GCCATTACCG ATGTTAGTTT CTGGGAAACT
GAAGAACAAC TTAAGCTGGC CGTAAATGGC TGCTATGCTT ATCTGAAAGG AAAAAGTGAA
ACCTTGCAGG ATAGCTATGT TGATCTGGAA CGCTGTGGCG ATAACATCAT CTATCCGCCA
CTTTCCGACT ACCTGTCTAT CTCTACCGGT GTTTTTGATT ATAACCTTCC CTCGATCAAT
AATGAGTGGG TAAAACAATA TGCTGCGATC CGCAGGTGCA ACCATTTTCT CCAGAATTAT
GAAAAAGCAA AGGGTGTAAA GCCAGATCTG CTCAGCAGGT ATGCCGCAGA AGTAAGGTTT
TTACGCGCCC ATTATTATAG CTTTCTGATC ATGTTGTTCG GCGATGTGCC TCTGATCACC
AAAACCTTAA ATATAGGTGA TCCGGAGATA ATGGCCACTC AGACGCCAAA GGCTGAAGTA
CTGAACTTTG TTTTGCAGGA ACTGGAAGCT GCAGCGCCTT CGCTTCCTCC AACTTATACA
GCCGTTGATT CGGGTAGGAT TACCAGGGGC GCAGCCCTGG GATGGAAAGC AAAAGTTGCC
TTGTTCTTTC AGAAATGGGA TGTGGCTGAA GCAGCCGCTA AAGCCGTTAT GAATTTAGGG
ATATACAGCT TGTACTCAAA TGGAAATACC AGCACAAGCT ACAAGGAACT GTTTACTTAC
AAAGGTAAAA TAACCAATGC TGCCAATAAA GAAACTATCC TGGCCAGGCC ATATCTTGCC
AATGTATCGG AGCATAACCT CAGCAGAGAA AGCTGGGTGC CCGATCAGGT TTCGCGTTTT
AGCATTACCA AATCCCTTGT AGATGCTTAT TTATGCAGCG ATGGAAAACC GATTGACAAA
TCTGCCTTAT ATAGCGAAAG CACTTATGCT GCTATTTTCC AGAACAGGGA TCCCCGGATG
ATACAAACTG TGCTAAGTCC AGGTACGGCT TGGGAAGGTA AAGATGACGG TGATCAGGAT
TCAAACCCAA ATGCCATTTT CAATTTGCCA AAATGGGATG CCGATAAAAA AGGAACGGTA
ACCGGTACAG GTTATTACAA CCTTAAATAT GTAGAGCCAA CTGCAGTGGG TGTTTATAAT
AAAGATGCCA ACGACATCCA TTTGCTGAGG TATGCGGAGG TCTTGCTGAC CTACGCAGAA
GCCAGGATGG AGCAGGGTAC TTTAACCCAG ACCGATCTGG ACGATACCAT TAATAAATTA
AGAACCAGGG TTGGTATGGT CCAGATGAAG ATCACTGAGC TGAATGCCTG GGGTATGGAC
CTTCGTACCG AGATCAGAAG GGAACGCAGG ATTGAGCTGG CACTGGAAGG ACACCGTTAT
TTTGATATCC TGCGCTGGAA GCAAGGCAGC TTACTGGCAG AAGATGTGAA AGGGATAAAG
AAAAGTCTTG TGCCGGCTTA CAATCAGGTC TACATTGCTA CTATCCCCAC AGATGCACAG
GGTTACCTTA TTATCAATTC AGGACGGAAA TTCGTAGAAC CTAAAAACTA CCTGTGGCCG
GTACCATTGC CACAAAAGGA TCTGAACCCT AATCTCATTC AGCCAGATGG CTGGAAATAA
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| Protein sequence | MNNENTSYKN RRSFLREATF YGLSSFIAMP ALASLLSGCS KDFLDRQPLD AITDVSFWET
EEQLKLAVNG CYAYLKGKSE TLQDSYVDLE RCGDNIIYPP LSDYLSISTG VFDYNLPSIN
NEWVKQYAAI RRCNHFLQNY EKAKGVKPDL LSRYAAEVRF LRAHYYSFLI MLFGDVPLIT
KTLNIGDPEI MATQTPKAEV LNFVLQELEA AAPSLPPTYT AVDSGRITRG AALGWKAKVA
LFFQKWDVAE AAAKAVMNLG IYSLYSNGNT STSYKELFTY KGKITNAANK ETILARPYLA
NVSEHNLSRE SWVPDQVSRF SITKSLVDAY LCSDGKPIDK SALYSESTYA AIFQNRDPRM
IQTVLSPGTA WEGKDDGDQD SNPNAIFNLP KWDADKKGTV TGTGYYNLKY VEPTAVGVYN
KDANDIHLLR YAEVLLTYAE ARMEQGTLTQ TDLDDTINKL RTRVGMVQMK ITELNAWGMD
LRTEIRRERR IELALEGHRY FDILRWKQGS LLAEDVKGIK KSLVPAYNQV YIATIPTDAQ
GYLIINSGRK FVEPKNYLWP VPLPQKDLNP NLIQPDGWK
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