| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2526 |
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| Symbol | |
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| ID | 8253633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2929814 |
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| End bp | 2931676 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936176 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003092792 |
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| Protein GI | 255532420 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.995023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTATT CGTTTTCGAT GGTTTTTCCT GCCCGTGCAC AGCAAGGCCG GGTTAAATTA
AATAAGGATA CCGTTAATAA ACTGAATGAA GTTGTAGTAA AAGAAAACAG GCTTCAGCTT
CCTTTTTCCA AGCAAAACAG AAACATCTGG ATCATGGACA GGGAGAAGGT CCTGGGTTTG
CCGGCAAGGT CAGTTGCCGA ATTGCTCAGC TATATTTCAG GTGTAGATGT CCGTCAGCGT
GGTCCCGGTG GTGTGCAGGC CGATATCAGT ATAGATGGGG GGACATTTGA CCAGTCGCTT
GTTCTGATCA ATGGCTTCAA AGTTTCTGAT CCGCAGACAG GCCACAACAT GATGAACCTA
CCCATAAGCA TAAACGATAT TGACCATATC GAAGTCTTGC GTGGATCGGC GTCCCGGGTT
TATGGTATTA ACGCTTTAAC CGGTGCCATT AATATTGTAA CCCGCAATGC GCAACAAACA
GGCCTTTCTG CAAATGTATT TGCCGGGAGT AGTTTTAAAG ACAATATTTC GGGTGATACA
TATTACAATT ATGGTCTTCA GGCCACAGGG AACCTGGTGT CAAAAACGGC TCAGCACTTG
TTTTCGGCCA GCCAGGAGGC AGGTAATGGC TATCGTTACA ATACTGCTTT TAACAATCAG
AAAGTATATT ACCAGGGAAA ATTTGCTGCG GGTAAAACGG ATGTAATTGA TGTGCTTGCC
GGTTATACCC ATAATAATTT TGGTGCAAAT GCTTTTTATT CGGCACCAGG CGATAAAGAA
GCAGAAGAAA CCGTAAAAAC AGCCCTGGCC TCAGTTTCTT ATACCGCTAA GCTGGGCCAA
AACTGGATAA TGGTGCCCAG AATCAGCTTC AGGAACAACA CAGATGATTA TCTTTACATC
AAACAAACGC CGGATAAATT TCATAACCAT CACCAGACTA ATGTTTTTGA TGCAGAACTG
AACAATAATA TACAAACCGA TATAGGGGTT TTTGGGCTCG GACTGGAAGC AAGGTCAGAG
CGCATTAACA GTACAAACCT GGGTAAAAGG AACCGTAACA ATGCAGGGCT TTTTGCTGAA
TATAAATTTG AACCGCTCAT ACATTTACAG ATCAACCTTG GGGCTTATAT AAATTACAAT
TCGGATTATG GATGGCAAAG CTTCCCGGGA CTGGACCTTG GATATAATTT TTATGGTAAC
TGGCGTGTAT TCGCCAATGT CGGAACCGGA CAACGCCTGC CTACGTATAC AGATCTCTAC
TATAAAGGAC CTACCAATAT CGGGAATGAT CAGCTAAAAC CGGAAAAATC CAGATATGCC
GAAGCCGGAG TTAAATTTAA CAACGAGAAC TTTACCATGA ATGCCAGTTA TTTCGTTCGC
CGCATAGATA ACTTCATTGA TTGGGTTAAA AATATACAGA CCGATCCATG GCAACCACAA
AACTTTAGCC GCGTAAATAC AAATGGTCTT ACCTTCAGTA CAGATTATAC CCGGAAACTG
GAAGGACAGG TTTTGAACCA CATCAGGATT GGTATAGCTT ATACCAATTT GGATCCCAGC
TTTAAAAAAA CATCGGCTAC AGCAAATTTT TCGCGTTATG CACTGGAAAG TCTGAGGAAC
CAACTGAGCA GTACCATCAG CGGAGAGTTT TATCAGCTGT TCTCGCTTAC GTTAACCAGC
CGCTACAATG AGCGCATCAA TTACAAGGAT TACATGACCA TGGATGCGAG AATAGCCTTT
AAGCAAAAAC ACTATAGCCT ATATGCTGAG GGGGCAAACC TGTTTAACAT TCAGTACATT
GAAGCTGGAG CAGTGCCCAT GCCTGGCAGC TGGTTTACAA CAGGGTTAAA AACGAGTTTT
TAA
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| Protein sequence | MFYSFSMVFP ARAQQGRVKL NKDTVNKLNE VVVKENRLQL PFSKQNRNIW IMDREKVLGL
PARSVAELLS YISGVDVRQR GPGGVQADIS IDGGTFDQSL VLINGFKVSD PQTGHNMMNL
PISINDIDHI EVLRGSASRV YGINALTGAI NIVTRNAQQT GLSANVFAGS SFKDNISGDT
YYNYGLQATG NLVSKTAQHL FSASQEAGNG YRYNTAFNNQ KVYYQGKFAA GKTDVIDVLA
GYTHNNFGAN AFYSAPGDKE AEETVKTALA SVSYTAKLGQ NWIMVPRISF RNNTDDYLYI
KQTPDKFHNH HQTNVFDAEL NNNIQTDIGV FGLGLEARSE RINSTNLGKR NRNNAGLFAE
YKFEPLIHLQ INLGAYINYN SDYGWQSFPG LDLGYNFYGN WRVFANVGTG QRLPTYTDLY
YKGPTNIGND QLKPEKSRYA EAGVKFNNEN FTMNASYFVR RIDNFIDWVK NIQTDPWQPQ
NFSRVNTNGL TFSTDYTRKL EGQVLNHIRI GIAYTNLDPS FKKTSATANF SRYALESLRN
QLSSTISGEF YQLFSLTLTS RYNERINYKD YMTMDARIAF KQKHYSLYAE GANLFNIQYI
EAGAVPMPGS WFTTGLKTSF
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