Gene Phep_2523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2523 
Symbol 
ID8253630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2926790 
End bp2927899 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content40% 
IMG OID644936173 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003092789 
Protein GI255532417 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.434668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGA GAATCGGATA TATAGTGCTG CTTTGTATTG TTTTTGCAGC ATGTAAAGAC 
AAAGGGAATT TTGTAGTAGA AGGAACATTT AAAAATGCGG CAGCAGGCAG TAAGGTTTAC
CTGTTTGGTA TACAAAAGGA TCAGGTAAAA CCCCTGGATT CAACAGTGTT TTCAGAAAAA
GGGGAGTTTA AATTTATCCA TAGCACGCCC GTAGTAGATT TTTTCAGGAT ATCTTCAGGT
CATAGTGAAT ACATGATTAT AGCCCAGAAT GGTGACCAGA TCAAAATACA GGCAGATCTG
GCCGATAAAA ACCTTGGCTA TACCATATCA GGTGCTGTAG AAGCAGATAA ACTGGAAGAA
CTGAACAAAA CTAAAAACCA GTATATGGTT AAGATAGGGG AGATCCAGCG CAGTTTTGAT
GAAGCCGTAG CCGCACAGCC CGATAAAAGG GACATGATCA TGGAGCAAAT GCGGCCTGCC
TATACCCAGG AGATTGATGG CTTAAACAAG GCTGTCCTTA AGTTCGCACA AAACAATACC
AGCTCGCTTG CGGGCTTTTA TGCCGTTAAT CTGTTAAACC CGGCAGAGTA TGAAAAAGAG
CTGGTAGATT ATGCCGATAA GATTAAAAGT AATTTCAATA ACAATGCTGC AGTTACCGAA
TTTCTGGTAA AAATGGCTAA ACTTAAATCT GTACAGGTAG GGCAGCAAGC CCCGGAATTT
ATCATCAACA GTGTAGATGG CAAGCCTATT AAACTGGCCG ATTTTAAAGG TAAATATGTA
ATGCTTGATT TCTGGGCATC ATGGTGTATG CCCTGCAGAC AGGAAAATCC CAATGTAGTG
AAAGCTTACA ATGCCTATAA AGATAAGAAT TTTACCATTT TAGGAATTTC CCTGGATAAA
GATGCAGAAG CCTGGAAAAA AGCCATAGCA GCCGATAACC TGAGCTGGGC ACATGCCAGC
GACCTGAAAG ATTTTGAAAG TCCAACAGCG TTGTTATATG GTATAGATGC CATTCCAAGT
TCTTTTATTG TAGATCCGAA TGGAAAAATA ATAGCTAAAA ACCTTCGCGG TGCAGAACTG
GATGCTTTTT TAAATAAAAC TTTACGCTAA
 
Protein sequence
MMKRIGYIVL LCIVFAACKD KGNFVVEGTF KNAAAGSKVY LFGIQKDQVK PLDSTVFSEK 
GEFKFIHSTP VVDFFRISSG HSEYMIIAQN GDQIKIQADL ADKNLGYTIS GAVEADKLEE
LNKTKNQYMV KIGEIQRSFD EAVAAQPDKR DMIMEQMRPA YTQEIDGLNK AVLKFAQNNT
SSLAGFYAVN LLNPAEYEKE LVDYADKIKS NFNNNAAVTE FLVKMAKLKS VQVGQQAPEF
IINSVDGKPI KLADFKGKYV MLDFWASWCM PCRQENPNVV KAYNAYKDKN FTILGISLDK
DAEAWKKAIA ADNLSWAHAS DLKDFESPTA LLYGIDAIPS SFIVDPNGKI IAKNLRGAEL
DAFLNKTLR