| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2514 |
|---|
| Symbol | |
|---|
| ID | 8253621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2915990 |
|---|
| End bp | 2917303 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644936164 |
|---|
| Product | PepSY-associated TM helix domain protein |
|---|
| Protein accession | YP_003092780 |
|---|
| Protein GI | 255532408 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACAG GAAACAAAAA TTCAGTTCCA AATAAAAAGA GTAAGGATAC TCTTTTTACC
AGGATCAATA AATGGCTTCA CTTATGGCTG GGGCTTGCCT CCGGTATCAT TGTGCTGATT
GTTTGTCTAA CAGGTTGTAT CTGGGTATTT AATGAAGAGA TCAATGGCCT GCTGGAACCA
AAAACAAGAA TTGAAAAACA AGATAAACCC GTACTCACAC CCGGACAGTT GTCGGCCATT
GTAGCCCGCG ATTATCCAGA TAAACTACCG GCATATGCCA CTTATCAGCA GGGGCGTACC
ATTAACCTTA ACCTGAAAGA TAAAGTAGAA AAAAAAGGAA GGGGCGAAAG AGGAGCTGGA
AGAAGGGGCG GGGGTACTAC CCTTAAAATT AACCCCTATA CCGGAGCAGT GGTGGTTACG
GAAGTCAGAA AAAAAAATGA GACTGATTTT TTCAGGTTCA TTCTGAACGG TCACCGGTTT
CTTTGGATGC CTTATGAGAT TGGCCGGCCT ATTGTAAATT ATGGAACCCT GGTATTTGTA
CTGCTCCTGA TTACAGGTCT GATCTGGTGG TATCCCAAAA AATGGAACAA ATCTACGCGC
GACAAGAGTT TTAAGGTCAA ATGGGGAGCT TCGTTTAAAA GGGTAAACCT CGATCTGCAC
AATGTACTGG GTTTTTATTC ATTGCTGTTT TTGCTGGCCA TTGCACTTAC GGGTATGGTC
TATGGCATTA AATGGTATAG TGAAGGTTTA TATTGGGTAA CCACCGGAGG AGAAAAACTG
GCAGAATTTA AAAGGCTGGA ATCAGATTCC CTGCAGGCCA ATAAATATTA TACACCAGAG
GCGGCTATGG ATCTGGCCTG GAATAAGGTC ATTGCAAAAC ATCCAAAATC GCAGGGCTTT
TATTATAATT TCCCGGATAC TTCAAAAGCT AAGGCTACAA TCGGCATTAC AGTATATCCC
AATACTGGTC AGTTTTACAA TAGCCAGGGT TATACTTTTG ATCAGCATAC GGCTAAAGAA
CTCCCCAGGG CAGATATCTA TTCCACAGCT TATGCTGAAG CAGGCCTTGG TGGCAAGCTC
CGTAAAATGA ATTACGACAT TCATGTAGGA AGTATACTTG GGTTTCCGGG TAAGGTAATG
GCCTTTCTGG CTTCATTAAT AGGGGCAAGT CTGCCTATAA CAGGGTTTTT GATCTGGTAT
GGCCGGAAAT TTAAAAAGAA AAAGAAGCCT GTAAAAGAAA CAGGCCATGT GGTTCAAAAG
CTGGCCGGAA AAAAGAAGGT AGCAATAGCA GTTGCTGATG AAGTGCCGCT TTAG
|
|---|
| Protein sequence | MTTGNKNSVP NKKSKDTLFT RINKWLHLWL GLASGIIVLI VCLTGCIWVF NEEINGLLEP
KTRIEKQDKP VLTPGQLSAI VARDYPDKLP AYATYQQGRT INLNLKDKVE KKGRGERGAG
RRGGGTTLKI NPYTGAVVVT EVRKKNETDF FRFILNGHRF LWMPYEIGRP IVNYGTLVFV
LLLITGLIWW YPKKWNKSTR DKSFKVKWGA SFKRVNLDLH NVLGFYSLLF LLAIALTGMV
YGIKWYSEGL YWVTTGGEKL AEFKRLESDS LQANKYYTPE AAMDLAWNKV IAKHPKSQGF
YYNFPDTSKA KATIGITVYP NTGQFYNSQG YTFDQHTAKE LPRADIYSTA YAEAGLGGKL
RKMNYDIHVG SILGFPGKVM AFLASLIGAS LPITGFLIWY GRKFKKKKKP VKETGHVVQK
LAGKKKVAIA VADEVPL
|
|---|
| |