Gene Phep_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2506 
Symbol 
ID8253613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2907122 
End bp2907688 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content46% 
IMG OID644936156 
Productpotassium-transporting ATPase, C subunit 
Protein accessionYP_003092772 
Protein GI255532400 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.318419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.621774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ACCTGTTACA ATCTATACGC CTTACTGCAG TACTGATGCT GCTCTTATGT 
GTCATCTATC CTTTAATTGT TGCCTTTGCA GGCAACTTTT CCAGAGGCAA TGGTGGGGGC
GAGAAAATCA CTAAAAACGG AAAAGTAGTG GGCTATGCCT TATTGGGACA AAACTTTAGC
CAACCCGAAT ATTTCTGGGG TAGGCCCTCT GCTGTGGCTT ACAACGCTGC CGGATCTGGA
GGCTCCAATA AGGGCCCTTC CAATGCCGAA TACCTGGCCT TAGTTTCAGG CAGGATCGAT
ACTTTGTTAA AATACCATCC CTACCTTAAA AAGGCAGATA TCCCTGCCGA TATGGTTGCT
GCATCGGGAA GCGGACTGGA TCCCAACATT TCCGAACAGG GGGCCATTAT ACAGATCAAA
AGGGTGGCAG CCACACGTGG CCTTACCGAA AGAACTGTTG CAGAACTGGT GGTAAAGTAT
ACCGAAGGCC CTTTTTTAGG GATGTTTGGT CCATCACGTG TAAATGTATT AAAGCTAAAT
CTGGCGCTCG ACGAATTAAA AAAATAA
 
Protein sequence
MKKYLLQSIR LTAVLMLLLC VIYPLIVAFA GNFSRGNGGG EKITKNGKVV GYALLGQNFS 
QPEYFWGRPS AVAYNAAGSG GSNKGPSNAE YLALVSGRID TLLKYHPYLK KADIPADMVA
ASGSGLDPNI SEQGAIIQIK RVAATRGLTE RTVAELVVKY TEGPFLGMFG PSRVNVLKLN
LALDELKK