Gene Phep_2504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2504 
Symbol 
ID8253611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2904830 
End bp2905960 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content44% 
IMG OID644936154 
ProductOsmosensitive K channel His kinase sensor 
Protein accessionYP_003092770 
Protein GI255532398 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.673839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.272614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAG AAAATAAAGC AAGCTCCGTA CGCAAATTTC TGGACCTGGT AAAGAAATCC 
AGAAGGGGGA AATTTAAAGT CTACATTGGC ATGAGCGCCG GTGTGGGCAA AACCTACCGG
ATGCTCCAGG AAGCACATGC ATTATTGAAA AATGGCATTG ATATCCATAT CGGTTATATC
GAAACGCACA ACCGCGCAGA AACACAGGCC CTCCTGGCCG GTATTCCCTT GATCCCCAGA
AGAAAATTGT TTTACAAGGG GAAAGAACTG GAAGAAATGG ATGTAAATAC TATCATTAAT
CTGCACCCTG AAGTTGTAAT TGTAGATGAA CTCGCACATA CCAATGTAGA AGGAAGTAAA
AATGGCAAAA GATGGCAGGA TGTGGTCGAC ATCCTGGAAG CCGGCATCAG TGTGATCTCG
GCCGTAAATA TCCAGCACCT GGAGAGCATG AACGAAGAGA TCGAAAAGAT TACCGGGATT
CCCATTACAG AAAGGATTCC CGACAGGATC CTGGAACTGG CCGATGAAAT TGTAAACATT
GACTTAACGG CAGACGAACT GATAGACCGC TTAAAGGCAG GTAAGATCTA TGACCACACA
AAAATTGAAC GTGCATTGGC TAACTTTTTT CAATCTGACA GGATATTGCA GCTCCGCGAG
CTTGCTTTAA AAGAAGTGGC CCATCATCTG GAAAGGAAGA TCAGTATAGA AATTCCCAAA
CAGATTAAAC TGAGGCCCGA ACGCTTTATG GCCTGTATCT CTACCAATAA GGAGACCGCC
AGGATCGTGA TCCGCAAAAC AGCCCGGCTG GCCTCTTATT ACCATTCATC CTGGATCGTG
CTGTATGTAC AGAACAACAG GGAAAGGGGC GATAAGGTAA AGCTTGATCT GCAGCGGCAC
CTGATCAATA ATTTTAAACT GGCCACAGAA CTGGGTGCGG AAGTGATCAA GATCAAAAGC
AACCAGATTA CACAAACTAT ACTAAAAATA GCAGAGGAAA AAGAGGTCAC TACGATATGC
ATCGGCAAGC CACATTTAAA TTTATTTCAG ATTATCATGA GAACCGCGAT TTTTAACCAA
CTTTTGCGCA GCATTTCAGC TACAGAAACC GATTTAGTGA TTTTGAGTTA G
 
Protein sequence
MEEENKASSV RKFLDLVKKS RRGKFKVYIG MSAGVGKTYR MLQEAHALLK NGIDIHIGYI 
ETHNRAETQA LLAGIPLIPR RKLFYKGKEL EEMDVNTIIN LHPEVVIVDE LAHTNVEGSK
NGKRWQDVVD ILEAGISVIS AVNIQHLESM NEEIEKITGI PITERIPDRI LELADEIVNI
DLTADELIDR LKAGKIYDHT KIERALANFF QSDRILQLRE LALKEVAHHL ERKISIEIPK
QIKLRPERFM ACISTNKETA RIVIRKTARL ASYYHSSWIV LYVQNNRERG DKVKLDLQRH
LINNFKLATE LGAEVIKIKS NQITQTILKI AEEKEVTTIC IGKPHLNLFQ IIMRTAIFNQ
LLRSISATET DLVILS