| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2498 |
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| Symbol | |
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| ID | 8253605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2897495 |
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| End bp | 2899807 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936148 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003092764 |
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| Protein GI | 255532392 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.111731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATT TATTTAGATA CTTAATTTTA TGTATAGGGC TGCTCATGCC TTTTTTGCAT
GGACATGCCC AGAACTTGCC TGTTAAAGGC CATATTTACG ATTCCCAGAC GCGTCAGCCG
CTCGCCGGGG TGATTTTGTT TAGTGCAAAC AATCAGCAAC TTACAAAATC TGATGCCAGG
GGATTTTTTG AAATAGCTGC TGTACAGCCC GACAATAAGA TTAGGGCAGT GCTGGCCGGA
TATAAAACCC AGAGTATCAA AATTAATACG GCTGAAAATG AACTCAATGT ACAACTGGAA
GCCGATGGGC TCAGCTTAAA CGAGGTCCGG ATTGCCGGTT ATAATAATGC AAACAAAACC
AATAAGGAAA CAGCCGGCGC AGTTGCATTG CTTACGGCTA AAGACATCAG TCGTGGCAGC
GGCTTGTCTT TGCAACCTGC ACTGAATGCC ATTCCCGGTG TGCGTATGGA CCAGAGTACG
CTCTCTGAAG CCCGTATTTC CATCCGGGGC AATGGTGTCC GTGCAGCTTA CGGTATCCGT
AGTGTTAAAA TTTACGTGAA TGAAATTCCT GTTACCGAAG CCGATGGAAC CACAAGGATT
GAAGCCCTCG ATGTCAACAG CATCGGCCGT GCCGAAATCA TTAAAGGCCC GGCCTCCAGC
ATCTATGGTG CAGGTACCGC CGGGGTCATC AACTTTCAGC TGCAGCGTGC ACCATATCAG
GAGCAAAGCC TGGAAGCTTC TGGTTTGGCA GGCTCCTATG GTTTGCACCG TCTGGCAGCT
ACTTACAGGA GTGGCGGCGA CAAGCTGAAC AGTTATGTTT CTTATGGCTG GCAGGAATAT
GAGGGCTACA GAGCACACAG TAACGACATG CGCAGGTTCC TTACCGGAAA TTTTCAGCTT
TTTCCGAGCG ATAAACGCAT CATTACCCTG ATGCTGAACA GGACCACCCA GCATTCCCAG
ATTCCGGGAT CGCTCACTGC AGCCCAGGTC GCTGCTGATC CTTTACAGGC CAATGCAGCC
AATCTGGATA AGCAGGCGGG CAGGTATCAG ACCTGGACAC GCATTGGATT AGGACAGCAA
TACCGTTTCA ACGATCAGTT TTCCAATTCT ACCAGTGTGT TTACGTATTT TTACGACCTG
GACCACCCGC TGCCCTATGC CTACATCCGG AATTTTTACC AGAGCTACGG CGGCAGGACC
CGCTTTACCT ATGATCCCGG ATTCAGCATT TTGCCCAGTA GGTTTACCCT GGGTGCCGAG
TTTAATGAAG GCCTCACCAA AGGCACCCAG TATGTCAACA ACCAGGGTAA GGAAGGCACA
GTCAACGCGA ATATAGACTA TCAGAACAGA CAGTATTCCC TTTTCTATCA GTCAGAAACC
ACACTGGCAC CACAAACCAC TTTAACATTG GGCTTAAGTT ATAACAGTCT GCGTTACGAT
GTTAAAGATT ACCTGAAGCA GAACCAAAGC GGTGTTAAAA AGTTCAATCC GCAGGCAACA
CCGAGAATTG CACTTAGCCA TACATTTAGT GAGGCCTTAA GTCTGCATGC CAGTGTCAGC
TCCGGCTTTT CCCCGCCATC CGGTTCAGAG ATCAAAAATG TAGATGGTTC CATTAATCCG
GTATTACAGG CCGAAAAAGC AATAAACTAT GAGTTGAATG CAAAAGGTAA CCTGTTGCAA
TCCAGGCTGG CGTACGACCT GGCCCTGTTT AAAATGGATA TGAAGGGTGA ACTGATCGCA
CAATCTGTAC AACAGGGCAT TACAGTTTAC AACAATGCCG GAAAAACAAG CCACAATGGC
GTAGAACTGG CCTTATCCTA TCAGCTGCTA AAAGCCACTG ATGAGGCAGA AATTATTAAT
CTGCGTCCTT TTGTGGCATT AACTTATTCA GATTTTAAGT TTAAAGATTA CAAAACTTTA
AATGCACAGG GAGAGGTTAC GGCCAGCTAT GACGGAAATA AATTAACAGG CATCGCACCC
TGGGTAATGA ATGCTGGTAT AGATCTTGAA ACCAGGACCG GGATTTATTT CTATGGAAAT
TATTTTTATA GCGACCGCCT TCCTTTAAAT GACGGCAATA CGGCTTATAA TGCTGCGTAC
CAGGTTTTAA ATGCAAAAAT CGGCTATAAA AAACAACTCG GCAATTGTCT GGAACTGAAT
GTTTACGCAG GCCTGGATAA TATTGGGAAT AAAAACTACA GTTCTATTGT ATCTTTAAAT
GCGATAGGCT ATGGCGGGGC ACAACCCCCA TACTTTAACC CCTCCCCAAA AAGAAATGGT
TATGGTGGTT TAAATCTAAA ATACTTATTT TAA
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| Protein sequence | MMNLFRYLIL CIGLLMPFLH GHAQNLPVKG HIYDSQTRQP LAGVILFSAN NQQLTKSDAR
GFFEIAAVQP DNKIRAVLAG YKTQSIKINT AENELNVQLE ADGLSLNEVR IAGYNNANKT
NKETAGAVAL LTAKDISRGS GLSLQPALNA IPGVRMDQST LSEARISIRG NGVRAAYGIR
SVKIYVNEIP VTEADGTTRI EALDVNSIGR AEIIKGPASS IYGAGTAGVI NFQLQRAPYQ
EQSLEASGLA GSYGLHRLAA TYRSGGDKLN SYVSYGWQEY EGYRAHSNDM RRFLTGNFQL
FPSDKRIITL MLNRTTQHSQ IPGSLTAAQV AADPLQANAA NLDKQAGRYQ TWTRIGLGQQ
YRFNDQFSNS TSVFTYFYDL DHPLPYAYIR NFYQSYGGRT RFTYDPGFSI LPSRFTLGAE
FNEGLTKGTQ YVNNQGKEGT VNANIDYQNR QYSLFYQSET TLAPQTTLTL GLSYNSLRYD
VKDYLKQNQS GVKKFNPQAT PRIALSHTFS EALSLHASVS SGFSPPSGSE IKNVDGSINP
VLQAEKAINY ELNAKGNLLQ SRLAYDLALF KMDMKGELIA QSVQQGITVY NNAGKTSHNG
VELALSYQLL KATDEAEIIN LRPFVALTYS DFKFKDYKTL NAQGEVTASY DGNKLTGIAP
WVMNAGIDLE TRTGIYFYGN YFYSDRLPLN DGNTAYNAAY QVLNAKIGYK KQLGNCLELN
VYAGLDNIGN KNYSSIVSLN AIGYGGAQPP YFNPSPKRNG YGGLNLKYLF
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