Gene Phep_2497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2497 
Symbol 
ID8253604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2896193 
End bp2897491 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content47% 
IMG OID644936147 
Producthypothetical protein 
Protein accessionYP_003092763 
Protein GI255532391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0531892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATGA AGAAGAAAAT AGCATTCCTG CTAATGGGTA CGGTACTGTG TTTTAACGCC 
TGTACCCGGA AAACCAATAT CCCCGAAGCA CAGCTTCTAA ATACAGGCGC TGCCGAAGCT
GTTGCCCCTT ATTTTACCAG AGACAACGAA GGCAATGCAG TGCTGTGCTG GACAGAAAAA
GATAGTAAAA ATTCCCTTTT CCGTTTAAAG TATGCCAGAT ACAATGTACA GGCCAGCCGG
TTTGATCAGG CCATTACGGT TCCCGCTTCG GCGGGATGCA GTAATGCTGC CGAAAGTATG
GCTAAGGTTG CATTTAAAGC AGATGGTACG GTACTGGCCA TCTTTGGCAA ACGCTTTCCA
AATGAAAAGA ATCCTTATGC AGGTGCCATA TATTATAGCC TGTCAACAGA TAAGGGAAAC
AACTGGTCCG AGGCCCGCTT CATACATACC GATACTGCTC ATACTTATGG CCGGGGCTTT
TTTGATGTGA CTACGTTAAA GGATGGCGAA CTTGGTGCCG TCTGGCTGGA CGGACGTTTT
GGAAAAAATA TCAAAGGCTC GGCCTTGTTT TTTGCCCGTA CAGCGCAGGG AAAAGGCTTT
GAAACAGATA CCTGTATCGA TAAAGGAACC TGCGAGTGCT GCCGTACTGA TATTTTTTCT
GATGGGGCAG GGAACATCCA CCTTGCTTAC AGGAATATCA GTTTCCCTGC TGAACTTTCA
GATCAGCAGG TGAGGGACAT GGCTTACAAG TCCTCTGCCG ATAATGGTAA AACCTTTAGT
GCAGCTAAAA CCATTAGTGC CGACAACTGG CAGCTCAACG GCTGTCCGCA TTCCGGGCCA
TCGCTTGCGG TAAGTAAGGG CCTTGTGCAT GCCGTATGGT TTACAGCTGG TGGCGGAGCA
GGTTTATACC ATACCTCTTC AGCAGGCCTG GGAGCTGATT TTCAAAGGCG TAACCTGATT
ACGGCTTCGG GCAGGCATCC ACAGCTGATT GCCCTCGAAG GGGATAAGCT GGCTATGGTC
TGTGAGGAAG CCCTGATTGC TGAACCTGAA AAACCAATGG AAATGAACCA TTCACATGGT
GGCATGAAAA TGAACCATAC AGCAGCTGGT CATGCAAAGA TCCTGGTAAA TATTTTAACA
GCAGGCATAC CGGAAAAAGC AATTGACGTT ACCGATGGTG CAGCAGCCGA TAACCATGCA
GTTTTAACCC CTCTTAAAGA TGGTTTGCTG ATTGCCTGGG TAAGGGAAGG AAAATCCGGA
TCAAAAATAT ATTATACTCG CGTAGCATTA ACAAAATAA
 
Protein sequence
MEMKKKIAFL LMGTVLCFNA CTRKTNIPEA QLLNTGAAEA VAPYFTRDNE GNAVLCWTEK 
DSKNSLFRLK YARYNVQASR FDQAITVPAS AGCSNAAESM AKVAFKADGT VLAIFGKRFP
NEKNPYAGAI YYSLSTDKGN NWSEARFIHT DTAHTYGRGF FDVTTLKDGE LGAVWLDGRF
GKNIKGSALF FARTAQGKGF ETDTCIDKGT CECCRTDIFS DGAGNIHLAY RNISFPAELS
DQQVRDMAYK SSADNGKTFS AAKTISADNW QLNGCPHSGP SLAVSKGLVH AVWFTAGGGA
GLYHTSSAGL GADFQRRNLI TASGRHPQLI ALEGDKLAMV CEEALIAEPE KPMEMNHSHG
GMKMNHTAAG HAKILVNILT AGIPEKAIDV TDGAAADNHA VLTPLKDGLL IAWVREGKSG
SKIYYTRVAL TK